RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
COPA-204ENST00000481522 LATS2Q9NRM7 1088 aa6.56□□□□□ -1.36
COPA-204ENST00000481522 NFICP08651 508 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 ESRRAP11474 423 aaPredicted RBP6.55□□□□□ -1.36
COPA-204ENST00000481522 RAB6AP20340 208 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 GSTM4Q03013 218 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 USPL1Q5W0Q7 1092 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 ZSWIM9Q86XI8 627 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 GALNT12Q8IXK2 581 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 NPHS2Q9NP85 383 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
COPA-204ENST00000481522 NPIPB6E9PJ23 425 aa6.54□□□□□ -1.36
COPA-204ENST00000481522 OVOL3O00110 214 aa6.54□□□□□ -1.36
COPA-204ENST00000481522 PEAR1Q5VY43 1037 aaPredicted RBP6.54□□□□□ -1.36
COPA-204ENST00000481522 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.362e-7■■□□□ 11.4
COPA-204ENST00000481522 MISP3Q96FF7 219 aa6.54□□□□□ -1.36
COPA-204ENST00000481522 BHLHE41Q9C0J9 482 aaPredicted RBP6.54□□□□□ -1.36
COPA-204ENST00000481522 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
COPA-204ENST00000481522 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
COPA-204ENST00000481522 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
COPA-204ENST00000481522 SYN1P17600 705 aa6.53□□□□□ -1.36
COPA-204ENST00000481522 BNIP3Q12983 259 aa6.53□□□□□ -1.36
COPA-204ENST00000481522 FLAD1Q8NFF5 587 aa6.53□□□□□ -1.36
COPA-204ENST00000481522 ASB16Q96NS5 453 aa6.53□□□□□ -1.36
COPA-204ENST00000481522 EHD4Q9H223 541 aa6.53□□□□□ -1.36
COPA-204ENST00000481522 PNMA6FA0A0J9YX94 578 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 A0A1W2PP55 124 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 TREHO43280 583 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 GADD45BO75293 160 aaPredicted RBP6.52□□□□□ -1.37
COPA-204ENST00000481522 OGFOD3Q6PK18 319 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 CCDC74AQ96AQ1 378 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 LIN37Q96GY3 246 aaPredicted RBP6.52□□□□□ -1.37
COPA-204ENST00000481522 GZF1Q9H116 711 aaPredicted RBP6.52□□□□□ -1.37
COPA-204ENST00000481522 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
COPA-204ENST00000481522 CD8BP10966 210 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 MAPK8P45983 427 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 PLCB3Q01970 1234 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
COPA-204ENST00000481522 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 DYMQ7RTS9 669 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 NRSN2Q9GZP1 204 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 NLRP2Q9NX02 1062 aa6.51□□□□□ -1.37
COPA-204ENST00000481522 PITPNM2Q9BZ72 1349 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 ATP2B2Q01814 1243 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
COPA-204ENST00000481522 CYP27C1Q4G0S4 372 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 CCNJLQ8IV13 435 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 PARD6AQ9NPB6 346 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 TRAK1Q9UPV9 953 aa6.5□□□□□ -1.37
COPA-204ENST00000481522 A0A096LPE4 126 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 A0A1W2PPZ6 126 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 NFIBO00712 420 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.371e-10■■■□□ 16.1
COPA-204ENST00000481522 DSC3Q14574 896 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 ENOX2Q16206 610 aaKnown RBP6.49□□□□□ -1.37
COPA-204ENST00000481522 AKAP4Q5JQC9 854 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 PRRT2Q7Z6L0 340 aaPredicted RBP6.49□□□□□ -1.37
COPA-204ENST00000481522 TCF12Q99081 682 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 ZFYVE1Q9HBF4 777 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
COPA-204ENST00000481522 CYP11A1P05108 521 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 MAOBP27338 520 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 ASPAP45381 313 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 GRIA4P48058 902 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 KCNMB1Q16558 191 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 PI4K2BQ8TCG2 481 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 NETO1Q8TDF5 533 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
COPA-204ENST00000481522 CLEC4MQ9H2X3 399 aaPredicted RBP6.48□□□□□ -1.37
COPA-204ENST00000481522 AP4E1Q9UPM8 1137 aa6.48□□□□□ -1.37
COPA-204ENST00000481522 DYNC1LI2O43237 492 aaPredicted RBP6.47□□□□□ -1.37
COPA-204ENST00000481522 PCDH1Q08174 1060 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 GRM2Q14416 872 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 POU4F3Q15319 338 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 KCNA10Q16322 511 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
COPA-204ENST00000481522 PRR23BQ6ZRT6 265 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 PLD6Q8N2A8 252 aaKnown RBP6.47□□□□□ -1.37
COPA-204ENST00000481522 FBF1Q8TES7 1133 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 BORCS6Q96GS4 357 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 GSX1Q9H4S2 264 aaPredicted RBP6.47□□□□□ -1.37
COPA-204ENST00000481522 VAV3Q9UKW4 847 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
COPA-204ENST00000481522 CTSBP07858 339 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 TRIM26Q12899 539 aaPredicted RBP6.46□□□□□ -1.38
COPA-204ENST00000481522 CCDC27Q2M243 656 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 CIAPIN1Q6FI81 312 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 ALG1LQ6GMV1 187 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 PI16Q6UXB8 463 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
COPA-204ENST00000481522 ABCB6Q9NP58 842 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 PPP4R2Q9NY27 417 aa6.46□□□□□ -1.38
COPA-204ENST00000481522 P4HBP07237 508 aaKnown RBP6.45□□□□□ -1.38
COPA-204ENST00000481522 ADRB1P08588 477 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms