RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 GNL3LQ9NVN8 582 aaKnown RBP22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 SLC12A7Q9Y666 1083 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 CCDC69A6NI79 296 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 IFIT3O14879 490 aaKnown RBP22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 MICU3Q86XE3 530 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 RNF41Q9H4P4 317 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 LRP2BPQ9P2M1 347 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 ECM29Q5VYK3 1845 aa22.15■■□□□ 1.14
TNFRSF8-204ENST00000479933 BECN2A8MW95 431 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 KIF28PB7ZC32 967 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 CDK11BP21127 795 aaKnown RBP22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 CMA1P23946 247 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 TDO2P48775 406 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 SLC39A14Q15043 492 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 KRT40Q6A162 431 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 ZSWIM5Q9P217 1185 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 SLC4A4Q9Y6R1 1079 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 BCL9LQ86UU0 1499 aa22.14■■□□□ 1.13
TNFRSF8-204ENST00000479933 SLFN14P0C7P3 912 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 CDC27P30260 824 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 NDUFA8P51970 172 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 ZRSR1Q15695 479 aaKnown RBP22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 NTRK3Q16288 839 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 C11orf57Q6ZUT1 292 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 CREBRFQ8IUR6 639 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 TMTC2Q8N394 836 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 A0A1B0GVL5 298 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 RCAN1P53805 252 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 CTDSPL2Q05D32 466 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 MRFAP1L1Q96HT8 127 aa22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 DDX41Q9UJV9 622 aaKnown RBP22.13■■□□□ 1.13
TNFRSF8-204ENST00000479933 ZNF804BA4D1E1 1349 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 SNAP23O00161 211 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 PTGS1P23219 599 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 SSRP1Q08945 709 aaKnown RBP22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 SF3B3Q15393 1217 aaKnown RBP22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 VPS37DQ86XT2 251 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 ANKRD18AQ8IVF6 992 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 LCORLQ8N3X6 602 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 MORC2Q9Y6X9 1032 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 PPP6R2O75170 966 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 UBE4AQ14139 1066 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 CCDC186Q7Z3E2 898 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 NKX2-3Q8TAU0 364 aa22.12■■□□□ 1.13
TNFRSF8-204ENST00000479933 ERICH2A1L162 156 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 FMNL1O95466 1100 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 IRX5P78411 483 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 NCBP1Q09161 790 aaKnown RBP22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 TIGD1Q96MW7 591 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 SENP2Q9HC62 589 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 GJB4Q9NTQ9 266 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 KIAA1468Q9P260 1216 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 CLIP2Q9UDT6 1046 aa22.11■■□□□ 1.13
TNFRSF8-204ENST00000479933 IFNAR1P17181 557 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 AXDND1Q5T1B0 1012 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 FAM217BQ9NTX9 383 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 PYCARDQ9ULZ3 195 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 CCDC196A0A1B0GTZ2 297 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 C17orf53Q8N3J3 647 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 PHKBQ93100 1093 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 BPIFA3Q9BQP9 254 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 BSDC1Q9NW68 430 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 LTBP4Q8N2S1 1624 aa22.1■■□□□ 1.13
TNFRSF8-204ENST00000479933 RXRAP19793 462 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 CYP7A1P22680 504 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 RBM6P78332 1123 aaKnown RBP22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 WTAPQ15007 396 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 DHX40Q8IX18 779 aaKnown RBP22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 TRIM22Q8IYM9 498 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 PRKAB2O43741 272 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 RANBP6O60518 1105 aaKnown RBP22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 NEMFO60524 1076 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 ZNF202O95125 648 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 AIFM3Q96NN9 605 aa22.09■■□□□ 1.13
TNFRSF8-204ENST00000479933 SLC3A2P08195 630 aaKnown RBP22.08■■□□□ 1.13
TNFRSF8-204ENST00000479933 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.13
TNFRSF8-204ENST00000479933 SLC26A6Q9BXS9 759 aa22.08■■□□□ 1.13
TNFRSF8-204ENST00000479933 INCENPQ9NQS7 918 aa22.08■■□□□ 1.13
TNFRSF8-204ENST00000479933 ANAPC4Q9UJX5 808 aa22.08■■□□□ 1.13
TNFRSF8-204ENST00000479933 CASZ1Q86V15 1759 aa22.08■■□□□ 1.12
TNFRSF8-204ENST00000479933 MAGEB6P1A0A0J9YX57 407 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 NUTM2BA6NNL0 878 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 NUTM2EB1AL46 878 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 PFKFB1P16118 471 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 SAFBQ15424 915 aaKnown RBP eCLIP22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 NUTM2AQ8IVF1 878 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 CCDC144CPQ8IYA2 1237 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 TOMM22Q9NS69 142 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 SCN7AQ01118 1682 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 PPARAQ07869 468 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 PPP2R5BQ15173 497 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 RTN1Q16799 776 aa22.07■■□□□ 1.12
TNFRSF8-204ENST00000479933 SLC10A5Q5PT55 438 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms