RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KDM6BO15054 1643 aa7.89□□□□□ -1.15
VPS50-214ENST00000477935 HMX2A2RU54 273 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 MAP4P27816 1152 aaKnown RBP7.88□□□□□ -1.15
VPS50-214ENST00000477935 USP11P51784 963 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS50-214ENST00000477935 KIF4BQ2VIQ3 1234 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 RASIP1Q5U651 963 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 CDPF1Q6NVV7 123 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 CLEC10AQ8IUN9 316 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 GRIN3AQ8TCU5 1115 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
VPS50-214ENST00000477935 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 ADGRL1O94910 1474 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 TMPRSS2O15393 492 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 FSTP19883 344 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 RXRBP28702 533 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 CCDC85BQ15834 202 aaPredicted RBP7.87□□□□□ -1.15
VPS50-214ENST00000477935 ZNF326Q5BKZ1 582 aaKnown RBP7.87□□□□□ -1.15
VPS50-214ENST00000477935 GPBAR1Q8TDU6 330 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 FBLIM1Q8WUP2 373 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 FAM83CQ9BQN1 747 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 GSX1Q9H4S2 264 aaPredicted RBP7.87□□□□□ -1.15
VPS50-214ENST00000477935 CACNA2D2Q9NY47 1150 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 VTI1BQ9UEU0 232 aa7.87□□□□□ -1.15
VPS50-214ENST00000477935 ID3Q02535 119 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 LLGL2Q6P1M3 1020 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 MPRIPQ6WCQ1 1025 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 CRELD1Q96HD1 420 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 FAM105AQ9NUU6 356 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
VPS50-214ENST00000477935 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.85□□□□□ -1.15
VPS50-214ENST00000477935 GSC2O15499 205 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 TRIM37O94972 964 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 RAB6AP20340 208 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 ASPAP45381 313 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 LRRC14Q15048 493 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 TAF1CQ15572 869 aaPredicted RBP7.85□□□□□ -1.15
VPS50-214ENST00000477935 EZH1Q92800 747 aaPredicted RBP7.85□□□□□ -1.15
VPS50-214ENST00000477935 YIPF2Q9BWQ6 316 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 CYP8B1Q9UNU6 501 aa7.85□□□□□ -1.15
VPS50-214ENST00000477935 USP31Q70CQ4 1352 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 MAPKBP1O60336 1514 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 FAM95CA0A1B0GW59 222 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 IGLV1-40P01703 118 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 ITGAEP38570 1179 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 ST13P50502 369 aaKnown RBP7.84□□□□□ -1.15
VPS50-214ENST00000477935 NFIAQ12857 509 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 SLC51AQ86UW1 340 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 FANCD2OSQ96PS1 177 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
VPS50-214ENST00000477935 ZNF16P17020 682 aaPredicted RBP7.83□□□□□ -1.16
VPS50-214ENST00000477935 NFKBIBQ15653 356 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 DBNDD2Q9BQY9 259 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 NOC4LQ9BVI4 516 aaKnown RBP7.83□□□□□ -1.16
VPS50-214ENST00000477935 SEMA6CQ9H3T2 930 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 ACSS3Q9H6R3 686 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 NUP160Q12769 1436 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 DISP3Q9P2K9 1392 aa7.83□□□□□ -1.16
VPS50-214ENST00000477935 FGD5Q6ZNL6 1462 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 NFICP08651 508 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 MRPL58Q14197 206 aaKnown RBP7.82□□□□□ -1.16
VPS50-214ENST00000477935 MAP3K11Q16584 847 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
VPS50-214ENST00000477935 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 ATXN3LQ9H3M9 355 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
VPS50-214ENST00000477935 LIG3P49916 1009 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 RPS26P62854 115 aaKnown RBP7.81□□□□□ -1.16
VPS50-214ENST00000477935 ERVK-24P63145 666 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 MAP7Q14244 749 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 ZMYM1Q5SVZ6 1142 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 GAL3ST3Q96A11 431 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 PIDD1Q9HB75 910 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 GRIN2AQ12879 1464 aa7.81□□□□□ -1.16
VPS50-214ENST00000477935 DIP2BQ9P265 1576 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 PRG4Q92954 1404 aaPredicted RBP7.8□□□□□ -1.16
VPS50-214ENST00000477935 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
VPS50-214ENST00000477935 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 MFSD14AQ96MC6 490 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 BCL11AQ9H165 835 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 PCDHA4Q9UN74 947 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
VPS50-214ENST00000477935 RLBP1P12271 317 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
VPS50-214ENST00000477935 LMNB1P20700 586 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 ZDHHC13Q8IUH4 622 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 RNF112Q9ULX5 631 aa7.79□□□□□ -1.16
VPS50-214ENST00000477935 TLR6Q9Y2C9 796 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms