RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SCRN1Q12765 414 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 SYNE3Q6ZMZ3 975 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 NSUN4Q96CB9 384 aaKnown RBP9.31□□□□□ -0.92
VMA21-203ENST00000477649 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
VMA21-203ENST00000477649 NOL10Q9BSC4 688 aaKnown RBP9.31□□□□□ -0.92
VMA21-203ENST00000477649 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 PARP3Q9Y6F1 533 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 NID2Q14112 1375 aa9.31□□□□□ -0.92
VMA21-203ENST00000477649 FSD2A1L4K1 749 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 VPS37CA5D8V6 355 aaPredicted RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 H3BQV1 296 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 SH2B2O14492 632 aaPredicted RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 CPLX1O14810 134 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 LDHBP07195 334 aaKnown RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 FGRP09769 529 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 PPP4CP60510 307 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 HAND2P61296 217 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 PPARAQ07869 468 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 APOBRQ0VD83 1088 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 SBK1Q52WX2 424 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 CCDC178Q5BJE1 867 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 DZIP1Q86YF9 867 aaKnown RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 TBC1D10CQ8IV04 446 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 AMOTL1Q8IY63 956 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 LCORLQ8N3X6 602 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 NSUN7Q8NE18 718 aaKnown RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 WASF1Q92558 559 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 ESR2Q92731 530 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 LARP6Q9BRS8 491 aaKnown RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 EPB41L4AQ9HCS5 686 aaPredicted RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 ARPP21Q9UBL0 812 aaPredicted RBP9.3□□□□□ -0.92
VMA21-203ENST00000477649 ATP6V0A2Q9Y487 856 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 LAMA4Q16363 1823 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
VMA21-203ENST00000477649 TNRC6CQ9HCJ0 1690 aaKnown RBP9.29□□□□□ -0.92
VMA21-203ENST00000477649 COL1A1P02452 1464 aaPredicted RBP9.29□□□□□ -0.92
VMA21-203ENST00000477649 NRXN2Q9P2S2 1712 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 KLF18A0A0U1RQI7 1052 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 GOLGA8BA8MQT2 603 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
VMA21-203ENST00000477649 UFL1O94874 794 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 SRGNP10124 158 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 ANTXR2P58335 489 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 MECOMQ03112 1051 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 STK3Q13188 491 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 STYK1Q6J9G0 422 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 MASTLQ96GX5 879 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 EYA3Q99504 573 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 ZNF287Q9HBT7 754 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 CD209Q9NNX6 404 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
VMA21-203ENST00000477649 MAST2Q6P0Q8 1798 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 FAM205AQ6ZU69 1335 aa9.29□□□□□ -0.92
VMA21-203ENST00000477649 CASZ1Q86V15 1759 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 CCDC69A6NI79 296 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 IFIT3O14879 490 aaKnown RBP9.28□□□□□ -0.92
VMA21-203ENST00000477649 ZBTB43O43298 467 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 ORC4O43929 436 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 CALM1P0DP23 149 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 CALM2P0DP24 149 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 CALM3P0DP25 149 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 METAP2P50579 478 aaKnown RBP eCLIP9.28□□□□□ -0.92
VMA21-203ENST00000477649 GPSM2P81274 684 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 PDE4BQ07343 736 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 TBC1D16Q8TBP0 767 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 IGDCC4Q8TDY8 1250 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 ZNF396Q96N95 335 aaPredicted RBP9.28□□□□□ -0.92
VMA21-203ENST00000477649 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 LRRC2Q9BYS8 371 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 STK32BQ9NY57 414 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 SLC12A7Q9Y666 1083 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 COL4A1P02462 1669 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 STK36Q9NRP7 1315 aa9.28□□□□□ -0.92
VMA21-203ENST00000477649 B4E1Z4 1266 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 CHAF1AQ13111 956 aaPredicted RBP9.27□□□□□ -0.93
VMA21-203ENST00000477649 WTAPQ15007 396 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 BRAPQ7Z569 592 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 USP48Q86UV5 1035 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 MIGA1Q8NAN2 632 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 LY9Q9HBG7 655 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 ZSWIM5Q9P217 1185 aa9.27□□□□□ -0.93
VMA21-203ENST00000477649 NAP1L2Q9ULW6 460 aaPredicted RBP9.27□□□□□ -0.93
VMA21-203ENST00000477649 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms