RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 LRRC2Q9BYS8 371 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 MCM9Q9NXL9 1143 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 LIMCH1Q9UPQ0 1083 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 PCDHAC2Q9Y5I4 1007 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 NEDD4P46934 1319 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 MYO3BQ8WXR4 1341 aa24.01■■□□□ 1.43
EDEM3-206ENST00000474725 USP17L8P0C7I0 530 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 TRDNQ13061 729 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 TOB2Q14106 344 aaPredicted RBP24■■□□□ 1.43
EDEM3-206ENST00000474725 SBK1Q52WX2 424 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 Q6ZUG5 572 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 STAG1Q8WVM7 1258 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 GMLQ99445 158 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 USP40Q9NVE5 1235 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 ZBTB12Q9Y330 459 aaPredicted RBP24■■□□□ 1.43
EDEM3-206ENST00000474725 TIAM2Q8IVF5 1701 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 CYP2D6P10635 497 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 RBM5P52756 815 aaKnown RBP eCLIP24■■□□□ 1.43
EDEM3-206ENST00000474725 EVX2Q03828 476 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 MFSD6Q6ZSS7 791 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 ARHGAP27Q6ZUM4 889 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 ARPP21Q9UBL0 812 aaPredicted RBP24■■□□□ 1.43
EDEM3-206ENST00000474725 SERPINA10Q9UK55 444 aa24■■□□□ 1.43
EDEM3-206ENST00000474725 NBR1Q14596 966 aa23.99■■□□□ 1.43
EDEM3-206ENST00000474725 CIAPIN1Q6FI81 312 aa23.99■■□□□ 1.43
EDEM3-206ENST00000474725 CDK5RAP2Q96SN8 1893 aa23.99■■□□□ 1.43
EDEM3-206ENST00000474725 B4E1Z4 1266 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 HSP90AA1P07900 732 aaKnown RBP23.98■■□□□ 1.43
EDEM3-206ENST00000474725 ANKRD1Q15327 319 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 CDC42EP5Q6NZY7 148 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 MCM5P33992 734 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 ANTXR2P58335 489 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 SLC4A8Q2Y0W8 1093 aa23.98■■□□□ 1.43
EDEM3-206ENST00000474725 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
EDEM3-206ENST00000474725 FLT1P17948 1338 aa23.97■■□□□ 1.43
EDEM3-206ENST00000474725 PRC1O43663 620 aa23.97■■□□□ 1.43
EDEM3-206ENST00000474725 CYB5R4Q7L1T6 521 aa23.97■■□□□ 1.43
EDEM3-206ENST00000474725 RNF41Q9H4P4 317 aaPredicted RBP23.97■■□□□ 1.43
EDEM3-206ENST00000474725 SAP30BPQ9UHR5 308 aaKnown RBP23.97■■□□□ 1.43
EDEM3-206ENST00000474725 TPCN1Q9ULQ1 816 aa23.97■■□□□ 1.43
EDEM3-206ENST00000474725 FGD1P98174 961 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 CFAP100Q494V2 611 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 RRP12Q5JTH9 1297 aaKnown RBP23.96■■□□□ 1.43
EDEM3-206ENST00000474725 C12orf60Q5U649 245 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 CNNM2Q9H8M5 875 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 NAV1Q8NEY1 1877 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 WDHD1O75717 1129 aaPredicted RBP23.96■■□□□ 1.43
EDEM3-206ENST00000474725 LARGE1O95461 756 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 CUL4AQ13619 759 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 AGBL3Q8NEM8 1001 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 KRT23Q9C075 422 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 TOMM22Q9NS69 142 aa23.96■■□□□ 1.43
EDEM3-206ENST00000474725 PICALMQ13492 652 aa23.95■■□□□ 1.42
EDEM3-206ENST00000474725 TNIP1Q15025 636 aa23.95■■□□□ 1.42
EDEM3-206ENST00000474725 BRF1Q92994 677 aa23.95■■□□□ 1.42
EDEM3-206ENST00000474725 ZSCAN31Q96LW9 406 aaPredicted RBP23.95■■□□□ 1.42
EDEM3-206ENST00000474725 AGXT2Q9BYV1 514 aa23.95■■□□□ 1.42
EDEM3-206ENST00000474725 LAMB1P07942 1786 aa23.95■■□□□ 1.42
EDEM3-206ENST00000474725 KDM4AO75164 1064 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
EDEM3-206ENST00000474725 ME3Q16798 604 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 DDX4Q9NQI0 724 aaKnown RBP23.94■■□□□ 1.42
EDEM3-206ENST00000474725 HDAC9Q9UKV0 1011 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 FZD9O00144 591 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 AMOTL1Q8IY63 956 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 GPHNQ9NQX3 736 aaPredicted RBP23.94■■□□□ 1.42
EDEM3-206ENST00000474725 ZSWIM5Q9P217 1185 aa23.94■■□□□ 1.42
EDEM3-206ENST00000474725 FOCADQ5VW36 1801 aa23.93■■□□□ 1.42
EDEM3-206ENST00000474725 WDR19Q8NEZ3 1342 aa23.93■■□□□ 1.42
EDEM3-206ENST00000474725 FGRP09769 529 aa23.93■■□□□ 1.42
EDEM3-206ENST00000474725 YBX3P16989 372 aaKnown RBP eCLIP23.93■■□□□ 1.42
EDEM3-206ENST00000474725 PLCD1P51178 756 aa23.93■■□□□ 1.42
EDEM3-206ENST00000474725 OGFOD1Q8N543 542 aa23.93■■□□□ 1.42
EDEM3-206ENST00000474725 PRMT6Q96LA8 375 aaPredicted RBP23.93■■□□□ 1.42
EDEM3-206ENST00000474725 SLC3A2P08195 630 aaKnown RBP23.92■■□□□ 1.42
EDEM3-206ENST00000474725 EIF6P56537 245 aaKnown RBP23.92■■□□□ 1.42
EDEM3-206ENST00000474725 FBXL16Q8N461 479 aa23.92■■□□□ 1.42
EDEM3-206ENST00000474725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.92■■□□□ 1.42
EDEM3-206ENST00000474725 PRDM1O75626 825 aa23.92■■□□□ 1.42
EDEM3-206ENST00000474725 APOBRQ0VD83 1088 aa23.92■■□□□ 1.42
EDEM3-206ENST00000474725 DYNLL2Q96FJ2 89 aa23.92■■□□□ 1.42
EDEM3-206ENST00000474725 SH2B1Q9NRF2 756 aaPredicted RBP23.92■■□□□ 1.42
EDEM3-206ENST00000474725 DDX60LQ5H9U9 1706 aaKnown RBP23.91■■□□□ 1.42
EDEM3-206ENST00000474725 PCP11498 1178 aaKnown RBP23.91■■□□□ 1.42
EDEM3-206ENST00000474725 LMNB1P20700 586 aa23.91■■□□□ 1.42
EDEM3-206ENST00000474725 CACNB3P54284 484 aa23.91■■□□□ 1.42
EDEM3-206ENST00000474725 NFIAQ12857 509 aa23.91■■□□□ 1.42
EDEM3-206ENST00000474725 TDRD3Q9H7E2 651 aaKnown RBP23.91■■□□□ 1.42
EDEM3-206ENST00000474725 ECM29Q5VYK3 1845 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 NECAB1Q8N987 351 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 ESR2Q92731 530 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 ROBO3Q96MS0 1386 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 PDE4BQ07343 736 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 DLGAP5Q15398 846 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 MYH1P12882 1939 aa23.9■■□□□ 1.42
EDEM3-206ENST00000474725 SPDYE2BA6NHP3 402 aa23.89■■□□□ 1.42
EDEM3-206ENST00000474725 ORC4O43929 436 aa23.89■■□□□ 1.42
EDEM3-206ENST00000474725 SPDYE6P0CI01 402 aa23.89■■□□□ 1.42
EDEM3-206ENST00000474725 ST3GAL1Q11201 340 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms