RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 LRRC10BA6NIK2 292 aa6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 ZNF862O60290 1169 aa6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 KIF4BQ2VIQ3 1234 aa6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 RPS26P11Q5JNZ5 115 aaPredicted RBP6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 SLC23A3Q6PIS1 610 aa6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 ANO2Q9NQ90 1003 aa6.98□□□□□ -1.29
RABGAP1-208ENST00000474707 TMEM265A0A087WTH1 108 aa6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 ABL1P00519 1130 aa6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 TNKS2Q9H2K2 1166 aa6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 NPHS2Q9NP85 383 aa6.97□□□□□ -1.29
RABGAP1-208ENST00000474707 CTSWP56202 376 aa6.96□□□□□ -1.3
RABGAP1-208ENST00000474707 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
RABGAP1-208ENST00000474707 TTLL4Q14679 1199 aa6.96□□□□□ -1.3
RABGAP1-208ENST00000474707 ZC3H12CQ9C0D7 883 aaKnown RBP6.96□□□□□ -1.3
RABGAP1-208ENST00000474707 KRT82Q9NSB4 513 aa6.96□□□□□ -1.3
RABGAP1-208ENST00000474707 ZNF503-AS2A6NEH8 195 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 NEFLP07196 543 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 ORC1Q13415 861 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 ARHGAP27Q6ZUM4 889 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 ZSWIM9Q86XI8 627 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 ANKLE2Q86XL3 938 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 PCOLCE2Q9UKZ9 415 aa6.95□□□□□ -1.3
RABGAP1-208ENST00000474707 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 NEFMP07197 916 aa6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 GSTP1P09211 210 aaKnown RBP6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 ZNF157P51786 506 aaPredicted RBP6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 SNX11Q9Y5W9 270 aa6.94□□□□□ -1.3
RABGAP1-208ENST00000474707 CPNE3O75131 537 aaKnown RBP6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 INHBBP09529 407 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 ITIH2P19823 946 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 MLANAQ16655 118 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 ISL2Q96A47 359 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 HEXIM2Q96MH2 286 aaKnown RBP6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
RABGAP1-208ENST00000474707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 ICMTO60725 284 aa6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 TSPAN15O95858 294 aa6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 KCNMB1Q16558 191 aa6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 FAM214BQ7L5A3 538 aa6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 PDZD3Q86UT5 571 aa6.92□□□□□ -1.3
RABGAP1-208ENST00000474707 CCDC74AQ96AQ1 378 aa6.91□□□□□ -1.3
RABGAP1-208ENST00000474707 FAM129BQ96TA1 746 aa6.91□□□□□ -1.3
RABGAP1-208ENST00000474707 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
RABGAP1-208ENST00000474707 CTNND2Q9UQB3 1225 aa6.91□□□□□ -1.3
RABGAP1-208ENST00000474707 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
RABGAP1-208ENST00000474707 ASB11Q8WXH4 323 aa6.9□□□□□ -1.3
RABGAP1-208ENST00000474707 PPP1R16BQ96T49 567 aa6.9□□□□□ -1.3
RABGAP1-208ENST00000474707 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
RABGAP1-208ENST00000474707 ERVK-24P63145 666 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 ZP2Q05996 745 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 PDE3BQ13370 1112 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 IKZF1Q13422 519 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 GRM2Q14416 872 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 KCNB2Q92953 911 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 LIN37Q96GY3 246 aaPredicted RBP6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
RABGAP1-208ENST00000474707 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 IGF2BP3O00425 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 PPP1R15AO75807 674 aaPredicted RBP6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 DBX2Q6ZNG2 339 aa6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
RABGAP1-208ENST00000474707 H3BRB1 525 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 NDUFB5O43674 189 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 IGHA2P01877 340 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 SYDE1Q6ZW31 735 aaPredicted RBP6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 TMEM39AQ9NV64 488 aa6.87□□□□□ -1.31
RABGAP1-208ENST00000474707 PITPNM2Q9BZ72 1349 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 PSPNO60542 156 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 AFMP43652 599 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 GPN3Q9UHW5 284 aaPredicted RBP6.86□□□□□ -1.31
RABGAP1-208ENST00000474707 ARID3CA6NKF2 412 aa6.85□□□□□ -1.31
RABGAP1-208ENST00000474707 GPR182O15218 404 aa6.85□□□□□ -1.31
RABGAP1-208ENST00000474707 KRT1P04264 644 aa6.85□□□□□ -1.31
RABGAP1-208ENST00000474707 GLI1P08151 1106 aa6.85□□□□□ -1.31
RABGAP1-208ENST00000474707 C1QTNF9P0C862 333 aa6.85□□□□□ -1.31
RABGAP1-208ENST00000474707 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms