RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 AEBP2Q6ZN18 517 aaPredicted RBP29.13■■■□□ 2.25
RABGAP1-208ENST00000474707 CHIC1Q5VXU3 224 aa27.2■■□□□ 1.94
RABGAP1-208ENST00000474707 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
RABGAP1-208ENST00000474707 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
RABGAP1-208ENST00000474707 FOXD1Q16676 465 aa23.4■■□□□ 1.34
RABGAP1-208ENST00000474707 POTEDQ86YR6 584 aa23.19■■□□□ 1.3
RABGAP1-208ENST00000474707 MSH5O43196 834 aa22.2■■□□□ 1.14
RABGAP1-208ENST00000474707 PIAS4Q8N2W9 510 aaPredicted RBP21.67■■□□□ 1.06
RABGAP1-208ENST00000474707 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
RABGAP1-208ENST00000474707 ADRA2BP18089 450 aa21.14■□□□□ 0.97
RABGAP1-208ENST00000474707 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
RABGAP1-208ENST00000474707 MAPK8IP2Q13387 824 aaPredicted RBP19.7■□□□□ 0.74
RABGAP1-208ENST00000474707 CACNB1Q02641 598 aaPredicted RBP19.66■□□□□ 0.74
RABGAP1-208ENST00000474707 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
RABGAP1-208ENST00000474707 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
RABGAP1-208ENST00000474707 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
RABGAP1-208ENST00000474707 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
RABGAP1-208ENST00000474707 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
RABGAP1-208ENST00000474707 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
RABGAP1-208ENST00000474707 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
RABGAP1-208ENST00000474707 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
RABGAP1-208ENST00000474707 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
RABGAP1-208ENST00000474707 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
RABGAP1-208ENST00000474707 POTEHQ6S545 545 aa18.01■□□□□ 0.47
RABGAP1-208ENST00000474707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.444e-9■■■□□ 15.6
RABGAP1-208ENST00000474707 DSG3P32926 999 aa17.39■□□□□ 0.37
RABGAP1-208ENST00000474707 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
RABGAP1-208ENST00000474707 CAPN15O75808 1086 aa17.34■□□□□ 0.37
RABGAP1-208ENST00000474707 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
RABGAP1-208ENST00000474707 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
RABGAP1-208ENST00000474707 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
RABGAP1-208ENST00000474707 ABCB7O75027 752 aa16.88■□□□□ 0.29
RABGAP1-208ENST00000474707 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
RABGAP1-208ENST00000474707 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
RABGAP1-208ENST00000474707 APLP2Q06481 763 aa16.66■□□□□ 0.26
RABGAP1-208ENST00000474707 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
RABGAP1-208ENST00000474707 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
RABGAP1-208ENST00000474707 KCNA4P22459 653 aa16.59■□□□□ 0.25
RABGAP1-208ENST00000474707 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
RABGAP1-208ENST00000474707 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
RABGAP1-208ENST00000474707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
RABGAP1-208ENST00000474707 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
RABGAP1-208ENST00000474707 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
RABGAP1-208ENST00000474707 POLA2Q14181 598 aa16.2■□□□□ 0.18
RABGAP1-208ENST00000474707 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
RABGAP1-208ENST00000474707 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
RABGAP1-208ENST00000474707 HAX1O00165 279 aa16.03■□□□□ 0.16
RABGAP1-208ENST00000474707 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
RABGAP1-208ENST00000474707 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
RABGAP1-208ENST00000474707 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
RABGAP1-208ENST00000474707 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
RABGAP1-208ENST00000474707 EVX2Q03828 476 aa15.75■□□□□ 0.11
RABGAP1-208ENST00000474707 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
RABGAP1-208ENST00000474707 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
RABGAP1-208ENST00000474707 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
RABGAP1-208ENST00000474707 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
RABGAP1-208ENST00000474707 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
RABGAP1-208ENST00000474707 LHX8Q68G74 356 aa15.46■□□□□ 0.07
RABGAP1-208ENST00000474707 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
RABGAP1-208ENST00000474707 GABBR2O75899 941 aa15.34■□□□□ 0.05
RABGAP1-208ENST00000474707 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
RABGAP1-208ENST00000474707 PLSCR2Q9NRY7 297 aa15.27■□□□□ 0.04
RABGAP1-208ENST00000474707 ZBTB22O15209 634 aa15.26■□□□□ 0.03
RABGAP1-208ENST00000474707 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
RABGAP1-208ENST00000474707 SPDYE2BA6NHP3 402 aa15.18■□□□□ 0.02
RABGAP1-208ENST00000474707 SPDYE6P0CI01 402 aa15.18■□□□□ 0.02
RABGAP1-208ENST00000474707 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
RABGAP1-208ENST00000474707 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
RABGAP1-208ENST00000474707 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
RABGAP1-208ENST00000474707 CHADLQ6NUI6 762 aa15.04■□□□□ -0
RABGAP1-208ENST00000474707 FBLN2P98095 1184 aa15.01□□□□□ -0.01
RABGAP1-208ENST00000474707 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
RABGAP1-208ENST00000474707 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
RABGAP1-208ENST00000474707 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
RABGAP1-208ENST00000474707 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
RABGAP1-208ENST00000474707 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
RABGAP1-208ENST00000474707 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
RABGAP1-208ENST00000474707 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
RABGAP1-208ENST00000474707 CLCN6P51797 869 aa14.71□□□□□ -0.05
RABGAP1-208ENST00000474707 FARP1Q9Y4F1 1045 aaPredicted RBP14.68□□□□□ -0.06
RABGAP1-208ENST00000474707 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
RABGAP1-208ENST00000474707 POTEMA6NI47 508 aa14.6□□□□□ -0.07
RABGAP1-208ENST00000474707 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
RABGAP1-208ENST00000474707 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
RABGAP1-208ENST00000474707 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
RABGAP1-208ENST00000474707 POTEB2H3BUK9 544 aa14.49□□□□□ -0.09
RABGAP1-208ENST00000474707 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
RABGAP1-208ENST00000474707 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
RABGAP1-208ENST00000474707 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
RABGAP1-208ENST00000474707 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
RABGAP1-208ENST00000474707 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
RABGAP1-208ENST00000474707 CREBZFQ9NS37 354 aa14.23□□□□□ -0.13
RABGAP1-208ENST00000474707 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
RABGAP1-208ENST00000474707 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
RABGAP1-208ENST00000474707 FAM163AQ96GL9 167 aaPredicted RBP14.14□□□□□ -0.15
RABGAP1-208ENST00000474707 POTEJP0CG39 1038 aa14.12□□□□□ -0.15
RABGAP1-208ENST00000474707 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
RABGAP1-208ENST00000474707 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
RABGAP1-208ENST00000474707 LCE2DQ5TA82 110 aaPredicted RBP14.1□□□□□ -0.15
RABGAP1-208ENST00000474707 MAMSTRQ6ZN01 415 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms