RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FNIP2Q9P278 1114 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 APEX2Q9UBZ4 518 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 TNKSO95271 1327 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 CILPO75339 1184 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 TRAPPC10P48553 1259 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 NEK3P51956 506 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 RALBP1Q15311 655 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 TCEA2Q15560 299 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ZNF697Q5TEC3 545 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 CEP120Q8N960 986 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ANKLE1Q8NAG6 615 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 HPS1Q92902 700 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 KIFC2Q96AC6 838 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 HOOK2Q96ED9 719 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 CCDC136Q96JN2 1154 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 C8orf48Q96LL4 319 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 TCEAL9Q9UHQ7 104 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ARHGEF11O15085 1522 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 ERCC6L2Q5T890 1561 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 POTECB2RU33 542 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 TMPRSS15P98073 1019 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 ABCB5Q2M3G0 1257 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 ARSHQ5FYA8 562 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 CT47A1Q5JQC4 288 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 PERM1Q5SV97 790 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 MAP1SQ66K74 1059 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 NBPF10Q6P3W6 841 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 TXNDC11Q6PKC3 985 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 NLRP13Q86W25 1043 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 FAM9BQ8IZU0 186 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 NBPF15Q8N660 670 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 RNF217Q8TC41 542 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 WDR89Q96FK6 387 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 ZNF512BQ96KM6 892 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 SLC9A7Q96T83 725 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 POP1Q99575 1024 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 DPH2Q9BQC3 489 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 ZNF576Q9H609 170 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 NCOA5Q9HCD5 579 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 SUCOQ9UBS9 1254 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 DAAM1Q9Y4D1 1078 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 A0A096LPE4 126 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 A0A1W2PPZ6 126 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 SH3BP5O60239 455 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 KPNA6O60684 536 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 MSX1P28360 303 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 GALEQ14376 348 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 DHX8Q14562 1220 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 TTC39BQ5VTQ0 682 aaPredicted RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 TREML4Q6UXN2 200 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 MYO1HQ8N1T3 1032 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 NINJ1Q92982 152 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 CRBNQ96SW2 442 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 RHOBTB2Q9BYZ6 727 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 CBX8Q9HC52 389 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 PKD2L1Q9P0L9 805 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 DDX20Q9UHI6 824 aaKnown RBP3.53□□□□□ -1.84
XRN1-210ENST00000472697 TAGLN3Q9UI15 199 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 CSADQ9Y600 493 aa3.53□□□□□ -1.84
XRN1-210ENST00000472697 PEG3Q9GZU2 1588 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 VSTM5A8MXK1 200 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 GIPC1O14908 333 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 TP53P04637 393 aaPredicted RBP3.52□□□□□ -1.85
XRN1-210ENST00000472697 RARAP10276 462 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 FXNQ16595 210 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 NBPF1Q3BBV0 1214 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 C4orf46Q504U0 113 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 KIAA1211LQ6NV74 962 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 KRT26Q7Z3Y9 468 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 NME8Q8N427 588 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 OR13H1Q8NG92 308 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 SLC7A14Q8TBB6 771 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 MFSD3Q96ES6 412 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 SCLYQ96I15 445 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 MIR1-1HGQ9H1L0 117 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 CRTAC1Q9NQ79 661 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 PGPEP1Q9NXJ5 209 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 SFMBT1Q9UHJ3 866 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 FAM50BQ9Y247 325 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 SENP3-EIF4A1A0A087X0R7 540 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 C9IYK1 514 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 PIP5K1CO60331 668 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 CTSBP07858 339 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 SERPINB3P29508 390 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 GGCXP38435 758 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 IARSP41252 1262 aaKnown RBP3.52□□□□□ -1.85
XRN1-210ENST00000472697 FXR1P51114 621 aaKnown RBP eCLIP3.52□□□□□ -1.85
XRN1-210ENST00000472697 ODF1Q14990 250 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 CWF19L2Q2TBE0 894 aaKnown RBP3.52□□□□□ -1.85
XRN1-210ENST00000472697 AKAP4Q5JQC9 854 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 ZFYVE27Q5T4F4 411 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 IER5Q5VY09 327 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 OVOS1Q6IE37 1185 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 PPP4R4Q6NUP7 873 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 VHLLQ6RSH7 139 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 MEIOBQ8N635 442 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 ATL2Q8NHH9 583 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 CHAC2Q8WUX2 184 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 LRGUKQ96M69 825 aa3.52□□□□□ -1.85
XRN1-210ENST00000472697 MTFR1LQ9H019 292 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms