RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 FZD9O00144 591 aa17.92■□□□□ 0.46
COL4A5-203ENST00000470339 LMNB1P20700 586 aa17.92■□□□□ 0.46
COL4A5-203ENST00000470339 RPS12P25398 132 aaKnown RBP17.92■□□□□ 0.46
COL4A5-203ENST00000470339 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
COL4A5-203ENST00000470339 RASSF7Q02833 373 aa17.92■□□□□ 0.46
COL4A5-203ENST00000470339 ARHGAP27Q6ZUM4 889 aa17.92■□□□□ 0.46
COL4A5-203ENST00000470339 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
COL4A5-203ENST00000470339 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
COL4A5-203ENST00000470339 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 USP17L21D6R901 530 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
COL4A5-203ENST00000470339 SLC3A2P08195 630 aaKnown RBP17.91■□□□□ 0.46
COL4A5-203ENST00000470339 FGRP09769 529 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 MCM5P33992 734 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 AK2P54819 239 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
COL4A5-203ENST00000470339 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 RALYLQ86SE5 291 aaKnown RBP17.91■□□□□ 0.46
COL4A5-203ENST00000470339 TBC1D10CQ8IV04 446 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 OGFOD1Q8N543 542 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 TGFBRAP1Q8WUH2 860 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
COL4A5-203ENST00000470339 KRT23Q9C075 422 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 USP40Q9NVE5 1235 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 LIMCH1Q9UPQ0 1083 aa17.91■□□□□ 0.46
COL4A5-203ENST00000470339 MINDY4BA8MYZ0 360 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 CPA1P15085 419 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 PRELPP51888 382 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 C12orf60Q5U649 245 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 CDC42EP5Q6NZY7 148 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
COL4A5-203ENST00000470339 MTMR14Q8NCE2 650 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 AGXT2Q9BYV1 514 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 MCM9Q9NXL9 1143 aa17.9■□□□□ 0.46
COL4A5-203ENST00000470339 GOLGB1Q14789 3259 aaKnown RBP17.89■□□□□ 0.45
COL4A5-203ENST00000470339 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
COL4A5-203ENST00000470339 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
COL4A5-203ENST00000470339 CTDSPL2Q05D32 466 aa17.89■□□□□ 0.45
COL4A5-203ENST00000470339 FLT1P17948 1338 aa17.89■□□□□ 0.45
COL4A5-203ENST00000470339 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
COL4A5-203ENST00000470339 RBM5P52756 815 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL4A5-203ENST00000470339 CFAP100Q494V2 611 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 DPF2Q92785 391 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 TMX3Q96JJ7 454 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 IDI2Q9BXS1 227 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
COL4A5-203ENST00000470339 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 ROBO3Q96MS0 1386 aa17.88■□□□□ 0.45
COL4A5-203ENST00000470339 ORC4O43929 436 aa17.87■□□□□ 0.45
COL4A5-203ENST00000470339 PDE4BQ07343 736 aa17.87■□□□□ 0.45
COL4A5-203ENST00000470339 CUL4AQ13619 759 aa17.87■□□□□ 0.45
COL4A5-203ENST00000470339 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
COL4A5-203ENST00000470339 Q6ZUG5 572 aa17.87■□□□□ 0.45
COL4A5-203ENST00000470339 MAPKAPK5Q8IW41 473 aa17.87■□□□□ 0.45
COL4A5-203ENST00000470339 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
COL4A5-203ENST00000470339 PRC1O43663 620 aa17.86■□□□□ 0.45
COL4A5-203ENST00000470339 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
COL4A5-203ENST00000470339 YBX3P16989 372 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL4A5-203ENST00000470339 ZNF280AP59817 542 aaPredicted RBP17.86■□□□□ 0.45
COL4A5-203ENST00000470339 COL9A3Q14050 684 aaPredicted RBP17.86■□□□□ 0.45
COL4A5-203ENST00000470339 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
COL4A5-203ENST00000470339 ESR2Q92731 530 aa17.86■□□□□ 0.45
COL4A5-203ENST00000470339 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
COL4A5-203ENST00000470339 ZNF287Q9HBT7 754 aa17.86■□□□□ 0.45
COL4A5-203ENST00000470339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL4A5-203ENST00000470339 CYP2D7A0A087X1C5 515 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 B4E1Z4 1266 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 NEDD4P46934 1319 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 EVCP57679 992 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 FGD1P98174 961 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 FKBP1CQ5VVH2 108 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
COL4A5-203ENST00000470339 PRMT6Q96LA8 375 aaPredicted RBP17.85■□□□□ 0.45
COL4A5-203ENST00000470339 ZSWIM5Q9P217 1185 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
COL4A5-203ENST00000470339 COL2A1P02458 1487 aaPredicted RBP17.84■□□□□ 0.45
COL4A5-203ENST00000470339 ENTPD3O75355 529 aa17.84■□□□□ 0.45
COL4A5-203ENST00000470339 HSP90AA1P07900 732 aaKnown RBP17.84■□□□□ 0.45
COL4A5-203ENST00000470339 CYP2D6P10635 497 aa17.84■□□□□ 0.45
COL4A5-203ENST00000470339 ANTXR2P58335 489 aa17.84■□□□□ 0.45
COL4A5-203ENST00000470339 ZBED3Q96IU2 234 aaPredicted RBP17.84■□□□□ 0.45
COL4A5-203ENST00000470339 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
COL4A5-203ENST00000470339 OSBPL5Q9H0X9 879 aaPredicted RBP17.84■□□□□ 0.45
COL4A5-203ENST00000470339 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
COL4A5-203ENST00000470339 MYH8P13535 1937 aa17.84■□□□□ 0.45
COL4A5-203ENST00000470339 KDM4AO75164 1064 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 CYB5R4Q7L1T6 521 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 GPC2Q8N158 579 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 TMTC2Q8N394 836 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 ZNF274Q96GC6 653 aaPredicted RBP17.83■□□□□ 0.44
COL4A5-203ENST00000470339 DDX4Q9NQI0 724 aaKnown RBP17.83■□□□□ 0.44
COL4A5-203ENST00000470339 INCENPQ9NQS7 918 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 TMOD2Q9NZR1 351 aa17.83■□□□□ 0.44
COL4A5-203ENST00000470339 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.44
COL4A5-203ENST00000470339 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms