RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 TGFBRAP1Q8WUH2 860 aa22.43■■□□□ 1.18
CCDC78-206ENST00000463539 MKRN1Q9UHC7 482 aaKnown RBP22.43■■□□□ 1.18
CCDC78-206ENST00000463539 RHBDL3P58872 404 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 HHIPL2Q6UWX4 724 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 CYB5R4Q7L1T6 521 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 STK11IPQ8N1F8 1099 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 TACC3Q9Y6A5 838 aa22.42■■□□□ 1.18
CCDC78-206ENST00000463539 MYH2Q9UKX2 1941 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 KDM4AO75164 1064 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 IARSP41252 1262 aaKnown RBP22.41■■□□□ 1.18
CCDC78-206ENST00000463539 APOBRQ0VD83 1088 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 RRP12Q5JTH9 1297 aaKnown RBP22.41■■□□□ 1.18
CCDC78-206ENST00000463539 AMOTL1Q8IY63 956 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
CCDC78-206ENST00000463539 PCP11498 1178 aaKnown RBP22.41■■□□□ 1.18
CCDC78-206ENST00000463539 ST3GAL1Q11201 340 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 STK3Q13188 491 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 MAPKAPK5Q8IW41 473 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 NIM1KQ8IY84 436 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
CCDC78-206ENST00000463539 BRCA1P38398 1863 aaKnown RBP22.4■■□□□ 1.18
CCDC78-206ENST00000463539 USP17L8P0C7I0 530 aa22.4■■□□□ 1.18
CCDC78-206ENST00000463539 CRKP46108 304 aa22.4■■□□□ 1.18
CCDC78-206ENST00000463539 NKX2-3Q8TAU0 364 aa22.4■■□□□ 1.18
CCDC78-206ENST00000463539 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
CCDC78-206ENST00000463539 SCN9AQ15858 1988 aa22.4■■□□□ 1.18
CCDC78-206ENST00000463539 SMIM22K7EJ46 135 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 CYP2D6P10635 497 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 HDLBPQ00341 1268 aaKnown RBP22.39■■□□□ 1.17
CCDC78-206ENST00000463539 ESR2Q92731 530 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 GTF3C6Q969F1 213 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 TMEM87BQ96K49 555 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 MRIQ9BWK5 157 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 ANGEL1Q9UNK9 670 aaKnown RBP22.39■■□□□ 1.17
CCDC78-206ENST00000463539 SMC3Q9UQE7 1217 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 FLT1P17948 1338 aa22.39■■□□□ 1.17
CCDC78-206ENST00000463539 NUCB2P80303 420 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 ZSWIM5Q9P217 1185 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 ZNRF3Q9ULT6 936 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 NAP1L2Q9ULW6 460 aaPredicted RBP22.38■■□□□ 1.17
CCDC78-206ENST00000463539 COL4A5P29400 1685 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 MYO3BQ8WXR4 1341 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 NFKBIEO00221 500 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 SH2B2O14492 632 aaPredicted RBP22.38■■□□□ 1.17
CCDC78-206ENST00000463539 EVCP57679 992 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 C12orf60Q5U649 245 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 ZNF274Q96GC6 653 aaPredicted RBP22.38■■□□□ 1.17
CCDC78-206ENST00000463539 ZDHHC15Q96MV8 337 aa22.38■■□□□ 1.17
CCDC78-206ENST00000463539 PFKFB2O60825 505 aa22.37■■□□□ 1.17
CCDC78-206ENST00000463539 RAD17O75943 681 aa22.37■■□□□ 1.17
CCDC78-206ENST00000463539 FGRP09769 529 aa22.37■■□□□ 1.17
CCDC78-206ENST00000463539 SART3Q15020 963 aaKnown RBP22.37■■□□□ 1.17
CCDC78-206ENST00000463539 RAB3GAP1Q15042 981 aa22.37■■□□□ 1.17
CCDC78-206ENST00000463539 SERPINA10Q9UK55 444 aa22.37■■□□□ 1.17
CCDC78-206ENST00000463539 SOCS7O14512 581 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 EVX2Q03828 476 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 PDE4BQ07343 736 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 SLC4A8Q2Y0W8 1093 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 TMEM67Q5HYA8 995 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 APOBEC3HQ6NTF7 200 aaKnown RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 RSBN1LQ6PCB5 846 aaPredicted RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 USP40Q9NVE5 1235 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 SAP30BPQ9UHR5 308 aaKnown RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 BAZ2AQ9UIF9 1905 aaKnown RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 ROBO3Q96MS0 1386 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 KLF18A0A0U1RQI7 1052 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 IFIT3O14879 490 aaKnown RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 PRDM1O75626 825 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 POLR3DP05423 398 aaPredicted RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 PDIA3P30101 505 aaKnown RBP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 RBM5P52756 815 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 JDP2Q8WYK2 163 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 MTA3Q9BTC8 594 aa22.36■■□□□ 1.17
CCDC78-206ENST00000463539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCDC78-206ENST00000463539 ZNF646O15015 1829 aaPredicted RBP22.35■■□□□ 1.17
CCDC78-206ENST00000463539 PSMD14O00487 310 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 ORC4O43929 436 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 SCRN1Q12765 414 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 IGDCC4Q8TDY8 1250 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 LAMB1P07942 1786 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 LTBP3Q9NS15 1303 aa22.35■■□□□ 1.17
CCDC78-206ENST00000463539 GOLGA8BA8MQT2 603 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 RANBP6O60518 1105 aaKnown RBP22.34■■□□□ 1.17
CCDC78-206ENST00000463539 VIL1P09327 827 aaKnown RBP22.34■■□□□ 1.17
CCDC78-206ENST00000463539 CDC42EP5Q6NZY7 148 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 LY9Q9HBG7 655 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 ERICH2A1L162 156 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 WDHD1O75717 1129 aaPredicted RBP22.34■■□□□ 1.17
CCDC78-206ENST00000463539 GJB2P29033 226 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 LIFRP42702 1097 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 PICALMQ13492 652 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 PKP1Q13835 747 aa22.34■■□□□ 1.17
CCDC78-206ENST00000463539 NAV1Q8NEY1 1877 aa22.33■■□□□ 1.17
CCDC78-206ENST00000463539 NFXL1Q6ZNB6 911 aa22.33■■□□□ 1.16
CCDC78-206ENST00000463539 CHMP4CQ96CF2 233 aa22.33■■□□□ 1.16
CCDC78-206ENST00000463539 FER1L6Q2WGJ9 1857 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms