RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 SARM1Q6SZW1 724 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 COL4A5P29400 1685 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 PTPRFP10586 1907 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 CYP2D7A0A087X1C5 515 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 MBD4O95243 580 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 PTPN21Q16825 1174 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 MICU3Q86XE3 530 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 SPATA5Q8NB90 893 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 FAM200AQ8TCP9 573 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 BCL11BQ9C0K0 894 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 ORC3Q9UBD5 711 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 LETM1O95202 739 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 MCM5P33992 734 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 GYG1P46976 350 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 ME1P48163 572 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 IQCB1Q15051 598 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 IGDCC4Q8TDY8 1250 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 ARID3AQ99856 593 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
NPHP1-209ENST00000461707 SRCAPQ6ZRS2 3230 aa8.55□□□□□ -1.04
NPHP1-209ENST00000461707 GSG1L2A8MUP6 293 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 CDC25BP30305 580 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 DDB1Q16531 1140 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 NCOA7Q8NI08 942 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 SDR42E1Q8WUS8 393 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 ZNF165P49910 485 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 NOLC1Q14978 699 aaKnown RBP eCLIP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 PTPAQ15257 358 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 ZSCAN16Q9H4T2 348 aaPredicted RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 BIN1O00499 593 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 SH2B2O14492 632 aaPredicted RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 FECHP22830 423 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 PUM3Q15397 648 aaKnown RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 ATL3Q6DD88 541 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 FSIP1Q8NA03 581 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 FBXO18Q8NFZ0 1043 aa8.54□□□□□ -1.04
NPHP1-209ENST00000461707 COL4A4P53420 1690 aaPredicted RBP8.54□□□□□ -1.04
NPHP1-209ENST00000461707 hCG_1642624A0A1W2PR95 340 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 GRIN1Q05586 938 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 CHRNDQ07001 517 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 UBE3CQ15386 1083 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 SPECC1Q5M775 1068 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 CCDC186Q7Z3E2 898 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 LY9Q9HBG7 655 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 UQCRHLA0A096LP55 91 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 UQCRHP07919 91 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 U2AF2P26368 475 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 APOA5Q6Q788 366 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 DHX40Q8IX18 779 aaKnown RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 FMR1NBQ8N0W7 255 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 LPIN2Q92539 896 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 C8orf76Q96K31 380 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 ZFYP08048 801 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 SEC23AQ15436 765 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 SLC4A8Q2Y0W8 1093 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 CERKQ8TCT0 537 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 PIBF1Q8WXW3 757 aa8.53□□□□□ -1.04
NPHP1-209ENST00000461707 SRP68Q9UHB9 627 aaKnown RBP8.53□□□□□ -1.04
NPHP1-209ENST00000461707 ADAMTS3O15072 1205 aa8.52□□□□□ -1.04
NPHP1-209ENST00000461707 DYNLL1P63167 89 aaKnown RBP8.52□□□□□ -1.04
NPHP1-209ENST00000461707 KIAA2012Q0VF49 1180 aa8.52□□□□□ -1.04
NPHP1-209ENST00000461707 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.04
NPHP1-209ENST00000461707 RALYLQ86SE5 291 aaKnown RBP8.52□□□□□ -1.04
NPHP1-209ENST00000461707 ANKS1AQ92625 1134 aa8.52□□□□□ -1.04
NPHP1-209ENST00000461707 CHMP4CQ96CF2 233 aa8.52□□□□□ -1.04
NPHP1-209ENST00000461707 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.04
NPHP1-209ENST00000461707 DDX19AQ9NUU7 478 aaKnown RBP8.52□□□□□ -1.04
NPHP1-209ENST00000461707 CFAP45Q9UL16 551 aa8.52□□□□□ -1.04
NPHP1-209ENST00000461707 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 DPCR1Q3MIW9 517 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 KIAA1524Q8TCG1 905 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 CELF1Q92879 486 aaKnown RBP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 MPHOSPH8Q99549 860 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 RIOK1Q9BRS2 568 aaKnown RBP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 CTNNA3Q9UI47 895 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 KCNJ14Q9UNX9 436 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 FOXN1O15353 648 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 ZNF75DP51815 510 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms