RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
PABPC4-208ENST00000461578 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
PABPC4-208ENST00000461578 PTPRAP18433 802 aa17.22■□□□□ 0.35
PABPC4-208ENST00000461578 PRRT2Q7Z6L0 340 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-208ENST00000461578 SMCR8Q8TEV9 937 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-208ENST00000461578 DIS3LQ8TF46 1054 aaKnown RBP17.22■□□□□ 0.35
PABPC4-208ENST00000461578 PAWRQ96IZ0 340 aaKnown RBP17.22■□□□□ 0.35
PABPC4-208ENST00000461578 PHF20L1A8MW92 1017 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 RGS3P49796 1198 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
PABPC4-208ENST00000461578 PXYLP1Q8TE99 480 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 LPIN2Q92539 896 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
PABPC4-208ENST00000461578 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 COL6A3P12111 3177 aa17.21■□□□□ 0.35
PABPC4-208ENST00000461578 ATRNL1Q5VV63 1379 aa17.2■□□□□ 0.34
PABPC4-208ENST00000461578 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
PABPC4-208ENST00000461578 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
PABPC4-208ENST00000461578 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
PABPC4-208ENST00000461578 PTPRFP10586 1907 aa17.19■□□□□ 0.34
PABPC4-208ENST00000461578 EYA2O00167 538 aa17.19■□□□□ 0.34
PABPC4-208ENST00000461578 IRF5Q13568 498 aa17.19■□□□□ 0.34
PABPC4-208ENST00000461578 C7orf61Q8IZ16 206 aa17.19■□□□□ 0.34
PABPC4-208ENST00000461578 PAK6Q9NQU5 681 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-208ENST00000461578 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-208ENST00000461578 LRRFIP2Q9Y608 721 aaKnown RBP17.19■□□□□ 0.34
PABPC4-208ENST00000461578 DOCK3Q8IZD9 2030 aa17.19■□□□□ 0.34
PABPC4-208ENST00000461578 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
PABPC4-208ENST00000461578 SH3BP5LQ7L8J4 393 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 NECAB2Q7Z6G3 386 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 COA7Q96BR5 231 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 SIL1Q9H173 461 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 SLC45A1Q9Y2W3 748 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 LAMA3Q16787 3333 aa17.18■□□□□ 0.34
PABPC4-208ENST00000461578 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
PABPC4-208ENST00000461578 DDTLA6NHG4 134 aaPredicted RBP17.17■□□□□ 0.34
PABPC4-208ENST00000461578 PICALMQ13492 652 aa17.17■□□□□ 0.34
PABPC4-208ENST00000461578 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
PABPC4-208ENST00000461578 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
PABPC4-208ENST00000461578 MRPL50Q8N5N7 158 aaKnown RBP17.17■□□□□ 0.34
PABPC4-208ENST00000461578 CRISPLD2Q9H0B8 497 aa17.17■□□□□ 0.34
PABPC4-208ENST00000461578 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.34
PABPC4-208ENST00000461578 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
PABPC4-208ENST00000461578 ENTPD3O75355 529 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 SYN1P17600 705 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 PHKA1P46020 1223 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 Q7L0L9 218 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 GDF15Q99988 308 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 DDX4Q9NQI0 724 aaKnown RBP17.16■□□□□ 0.34
PABPC4-208ENST00000461578 AGTPBP1Q9UPW5 1226 aa17.16■□□□□ 0.34
PABPC4-208ENST00000461578 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
PABPC4-208ENST00000461578 DEFB123Q8N688 67 aa17.15■□□□□ 0.34
PABPC4-208ENST00000461578 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
PABPC4-208ENST00000461578 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
PABPC4-208ENST00000461578 CAPN2P17655 700 aa17.14■□□□□ 0.33
PABPC4-208ENST00000461578 TRIM32Q13049 653 aa17.14■□□□□ 0.33
PABPC4-208ENST00000461578 FAM110CQ1W6H9 321 aa17.14■□□□□ 0.33
PABPC4-208ENST00000461578 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
PABPC4-208ENST00000461578 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
PABPC4-208ENST00000461578 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
PABPC4-208ENST00000461578 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 HMGCRP04035 888 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 BMP8BP34820 402 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 PNMA3Q9UL41 463 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 GAKO14976 1311 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 PTPRCP08575 1304 aa17.13■□□□□ 0.33
PABPC4-208ENST00000461578 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
PABPC4-208ENST00000461578 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
PABPC4-208ENST00000461578 ADORA1P30542 326 aa17.12■□□□□ 0.33
PABPC4-208ENST00000461578 BTDP43251 543 aa17.12■□□□□ 0.33
PABPC4-208ENST00000461578 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-208ENST00000461578 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
PABPC4-208ENST00000461578 SEMA3EO15041 775 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 MAGEA10P43363 369 aaPredicted RBP17.11■□□□□ 0.33
PABPC4-208ENST00000461578 SPP2Q13103 211 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
PABPC4-208ENST00000461578 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 C11orf49Q9H6J7 331 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
PABPC4-208ENST00000461578 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
PABPC4-208ENST00000461578 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
PABPC4-208ENST00000461578 HMGCS2P54868 508 aa17.1■□□□□ 0.33
PABPC4-208ENST00000461578 CCDC102BQ68D86 513 aa17.1■□□□□ 0.33
PABPC4-208ENST00000461578 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
PABPC4-208ENST00000461578 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
PABPC4-208ENST00000461578 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
PABPC4-208ENST00000461578 CIAO1O76071 339 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 RASGRF1Q13972 1273 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 TDHQ8IZJ6 230 aa17.09■□□□□ 0.33
PABPC4-208ENST00000461578 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms