RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 WNK3Q9BYP7 1800 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 MEGF6O75095 1541 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 AXIN1O15169 862 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 KRT27Q7Z3Y8 459 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 NLRP8Q86W28 1048 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 CEP63Q96MT8 703 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 TMEM63CQ9P1W3 806 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 VTI1BQ9UEU0 232 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 LRRC37A3O60309 1634 aa10.75□□□□□ -0.69
ECHDC1-212ENST00000461239 EGFRP00533 1210 aa10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 EPB42P16452 691 aa10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 HDLBPQ00341 1268 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 MARCH10Q8NA82 808 aaPredicted RBP10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
ECHDC1-212ENST00000461239 NRG2O14511 850 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 THBS1P07996 1170 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 IL2RBP14784 551 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 GAS2L1Q99501 681 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 BRD7Q9NPI1 651 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 AK5Q9Y6K8 562 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 IGSF1Q8N6C5 1336 aa10.73□□□□□ -0.69
ECHDC1-212ENST00000461239 XYLBO75191 536 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 DDB1Q16531 1140 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 PGBD3Q8N328 593 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 CCDC74AQ96AQ1 378 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 FRMD6Q96NE9 622 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 ZCCHC2Q9C0B9 1178 aaKnown RBP10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 CHRDQ9H2X0 955 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 C11orf16Q9NQ32 467 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 RGPD1P0DJD0 1748 aa10.72□□□□□ -0.69
ECHDC1-212ENST00000461239 OVOS2A0A0G2JMS6 1433 aa10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 PHACTR2O75167 634 aa10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 CTSHP09668 335 aa10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 TNS2Q63HR2 1409 aa10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 PI16Q6UXB8 463 aa10.71□□□□□ -0.69
ECHDC1-212ENST00000461239 EXOC5O00471 708 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 IRS1P35568 1242 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 KCNQ4P56696 695 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 FANCCQ00597 558 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 LBRQ14739 615 aaKnown RBP10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 ATP13A2Q9NQ11 1180 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 SPG7Q9UQ90 795 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
ECHDC1-212ENST00000461239 KDRP35968 1356 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 EFSO43281 561 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 DIAPH1O60610 1272 aaKnown RBP10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 FAM157BP0CG42 384 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 UBAP2LQ14157 1087 aaKnown RBP10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 RALBP1Q15311 655 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 EFHC2Q5JST6 749 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 EPS8L3Q8TE67 593 aaKnown RBP10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 CRELD1Q96HD1 420 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 METTL5Q9NRN9 209 aaKnown RBP10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 CNTN3Q9P232 1028 aa10.69□□□□□ -0.7
ECHDC1-212ENST00000461239 BCL9O00512 1426 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 CYP27B1O15528 508 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 MAN1A2O60476 641 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 RAD51AP2Q09MP3 1159 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 SULT6B1Q6IMI4 303 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 C1orf127Q8N9H9 656 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 ZCRB1Q8TBF4 217 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 ABI2Q9NYB9 513 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-212ENST00000461239 HMOX1P09601 288 aa10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 ERCC5P28715 1186 aaPredicted RBP10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 FAM196AQ6ZSG2 479 aa10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 DDX54Q8TDD1 881 aaKnown RBP10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 RAPGEF4Q8WZA2 1011 aa10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 C12orf49Q9H741 205 aa10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
ECHDC1-212ENST00000461239 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 SLC35F4A4IF30 521 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 EREGO14944 169 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 KCNQ2O43526 872 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 TRIM37O94972 964 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 POLR3DP05423 398 aaPredicted RBP10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 EIF4BP23588 611 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 PTSQ03393 145 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 SFSWAPQ12872 951 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 GALNT12Q8IXK2 581 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 HCN2Q9UL51 889 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 PKD1L3Q7Z443 1732 aa10.66□□□□□ -0.7
ECHDC1-212ENST00000461239 GIPC1O14908 333 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 ATXN7O15265 892 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 VEGFBP49765 207 aa10.65□□□□□ -0.7
ECHDC1-212ENST00000461239 CCDC184Q52MB2 194 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms