RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 MYL5Q02045 173 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 RESP18Q5W5W9 173 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 KRT40Q6A162 431 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 FCHSD1Q86WN1 690 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 IFNL3Q8IZI9 196 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 IGDCC4Q8TDY8 1250 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 LY9Q9HBG7 655 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 ZBTB1Q9Y2K1 713 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 CLIC4Q9Y696 253 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 ZNF831Q5JPB2 1677 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 PDS5AQ29RF7 1337 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 A0A1B0GVL5 298 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 B4E1Z4 1266 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 RBM10P98175 930 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 AKAP17AQ02040 695 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 WTAPQ15007 396 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 RTN1Q16799 776 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 SLFNL1Q499Z3 407 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 CLEC4GQ6UXB4 293 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 MICU3Q86XE3 530 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 NOSTRINQ8IVI9 506 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 KIF18AQ8NI77 898 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 CACTINQ8WUQ7 758 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 ESR2Q92731 530 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 FEZ1Q99689 392 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 UBAC1Q9BSL1 405 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 RNF26Q9BY78 433 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 CGNQ9P2M7 1197 aaKnown RBP10.19□□□□□ -0.78
HDAC3-202ENST00000459727 ANAPC4Q9UJX5 808 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 AKAP11Q9UKA4 1901 aa10.19□□□□□ -0.78
HDAC3-202ENST00000459727 UBN2Q6ZU65 1347 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 MBD4O95243 580 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 SMC2O95347 1197 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 MMP1P03956 469 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 RASGRF1Q13972 1273 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 PTPAQ15257 358 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 NTRK3Q16288 839 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 CYB5R4Q7L1T6 521 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 SMAP1Q8IYB5 467 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-202ENST00000459727 MAGEB6Q8N7X4 407 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 MLKLQ8NB16 471 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 ANKRD7Q92527 254 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 C16orf45Q96MC5 204 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-202ENST00000459727 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-202ENST00000459727 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC3-202ENST00000459727 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 BCL2L12Q9HB09 334 aa10.18□□□□□ -0.78
HDAC3-202ENST00000459727 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.18□□□□□ -0.78
HDAC3-202ENST00000459727 NUP98P52948 1817 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 ZNF804BA4D1E1 1349 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 NEDD4P46934 1319 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 DOT1LQ8TEK3 1739 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 DTNBO60941 627 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 UBE4AQ14139 1066 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 PI16Q6UXB8 463 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 NYAP1Q6ZVC0 841 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 FAM177A1Q8N128 213 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-202ENST00000459727 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
HDAC3-202ENST00000459727 MPNDQ8N594 471 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 CNNM3Q8NE01 707 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 MAP3K14Q99558 947 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 BRIP1Q9BX63 1249 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 LRP2BPQ9P2M1 347 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 KCNH3Q9ULD8 1083 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 DENND2AQ9ULE3 1009 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 SLC4A4Q9Y6R1 1079 aa10.17□□□□□ -0.78
HDAC3-202ENST00000459727 GSG1L2A8MUP6 293 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 KIF28PB7ZC32 967 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 DDAH1O94760 285 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 CCZ1BP86790 482 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 CCZ1P86791 482 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-202ENST00000459727 LRMPQ12912 555 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 CAVIN4Q5BKX8 364 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 KRBA2Q6ZNG9 492 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 FILIP1Q7Z7B0 1213 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 CCDC144CPQ8IYA2 1237 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 C17orf53Q8N3J3 647 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-202ENST00000459727 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-202ENST00000459727 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 SRRTQ9BXP5 876 aaKnown RBP10.16□□□□□ -0.78
HDAC3-202ENST00000459727 SLC26A6Q9BXS9 759 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-202ENST00000459727 ZSWIM5Q9P217 1185 aa10.16□□□□□ -0.78
HDAC3-202ENST00000459727 NRBP1Q9UHY1 535 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms