RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CHRNDQ07001 517 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 KCNF1Q9H3M0 494 aa18.66■□□□□ 0.58
LSS-205ENST00000457828 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
LSS-205ENST00000457828 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 ELP1O95163 1332 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 PSDA5PKW4 1024 aaPredicted RBP18.65■□□□□ 0.58
LSS-205ENST00000457828 ERLIN1O75477 346 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 ZAP70P43403 619 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 CLEC4GQ6UXB4 293 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 KAT14Q9H8E8 782 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 C3P01024 1663 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 ESR2Q92731 530 aa18.65■□□□□ 0.58
LSS-205ENST00000457828 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
LSS-205ENST00000457828 BCAMP50895 628 aa18.64■□□□□ 0.57
LSS-205ENST00000457828 SCRN1Q12765 414 aa18.64■□□□□ 0.57
LSS-205ENST00000457828 LMAN1P49257 510 aa18.64■□□□□ 0.57
LSS-205ENST00000457828 KIF5CO60282 957 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 ZNF76P36508 570 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 KARSQ15046 597 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 MFSD14BQ5SR56 506 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 CPDO75976 1380 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 NF2P35240 595 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 NCBP1Q09161 790 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 JAKMIP3Q5VZ66 844 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 WASF1Q92558 559 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 CDK5RAP3Q96JB5 506 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 LLPHQ9BRT6 129 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 EIF3JO75822 258 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 SASH1O94885 1247 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 CYP21A2P08686 494 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 KBTBD3Q8NAB2 608 aa18.63■□□□□ 0.57
LSS-205ENST00000457828 NOC3LQ8WTT2 800 aaKnown RBP18.63■□□□□ 0.57
LSS-205ENST00000457828 FAM193AP78312 1265 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 GABPB1Q06547 395 aaPredicted RBP18.62■□□□□ 0.57
LSS-205ENST00000457828 MCM6Q14566 821 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 GNAT2P19087 354 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
LSS-205ENST00000457828 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
LSS-205ENST00000457828 CARD6Q9BX69 1037 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 ARFGAP3Q9NP61 516 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
LSS-205ENST00000457828 ZNF202O95125 648 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 ATP2B4P23634 1241 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 FANCCQ00597 558 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 WTAPQ15007 396 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 COPRSQ9NQ92 184 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
LSS-205ENST00000457828 COL15A1P39059 1388 aa18.62■□□□□ 0.57
LSS-205ENST00000457828 PDE8BO95263 885 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 NAP1L1P55209 391 aaKnown RBP18.61■□□□□ 0.57
LSS-205ENST00000457828 ARMT1Q9H993 441 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.574e-6■□□□□ 10.1
LSS-205ENST00000457828 DEFB132Q7Z7B7 95 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
LSS-205ENST00000457828 ATP5JP18859 108 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 KRT23Q9C075 422 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 ZNF408Q9H9D4 720 aa18.61■□□□□ 0.57
LSS-205ENST00000457828 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 ADRA2BP18089 450 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 KIAA0825Q8IV33 1275 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 TXLNAP40222 546 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 EVCP57679 992 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
LSS-205ENST00000457828 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
LSS-205ENST00000457828 BBOX1O75936 387 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 MYL5Q02045 173 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 PCDHA7Q9UN72 937 aa18.6■□□□□ 0.57
LSS-205ENST00000457828 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
LSS-205ENST00000457828 E7EWF7 191 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 UTP14CQ5TAP6 766 aaKnown RBP18.59■□□□□ 0.57
LSS-205ENST00000457828 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 ZBTB43O43298 467 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 KIF5BP33176 963 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 PTPN21Q16825 1174 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 ANO1Q5XXA6 986 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 RUFY1Q96T51 708 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 KIAA1468Q9P260 1216 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 AFMP43652 599 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 TNNI2P48788 182 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 APPBP2Q92624 585 aa18.59■□□□□ 0.57
LSS-205ENST00000457828 TCP10Q12799 353 aa18.58■□□□□ 0.57
LSS-205ENST00000457828 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms