RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 C15orf52Q6ZUT6 534 aaKnown RBP10.33□□□□□ -0.76
RPE-216ENST00000454822 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 MYL10Q9BUA6 226 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 GJB4Q9NTQ9 266 aa10.33□□□□□ -0.76
RPE-216ENST00000454822 AATFQ9NY61 560 aaKnown RBP eCLIP10.33□□□□□ -0.76
RPE-216ENST00000454822 MYH13Q9UKX3 1938 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 BBOX1O75936 387 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 HOXA10P31260 410 aaPredicted RBP10.32□□□□□ -0.76
RPE-216ENST00000454822 CTR9Q6PD62 1173 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 TMED8Q6PL24 325 aaPredicted RBP10.32□□□□□ -0.76
RPE-216ENST00000454822 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 RGS22Q8NE09 1264 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 WDR66Q8TBY9 1149 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 GPR101Q96P66 508 aaPredicted RBP10.32□□□□□ -0.76
RPE-216ENST00000454822 USP28Q96RU2 1077 aa10.32□□□□□ -0.76
RPE-216ENST00000454822 FTOQ9C0B1 505 aaKnown RBP eCLIP10.32□□□□□ -0.76
RPE-216ENST00000454822 ERICH2A1L162 156 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 USP17L12C9JPN9 530 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 USP17L21D6R901 530 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 ESR2Q92731 530 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 PHKBQ93100 1093 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 ALG1Q9BT22 464 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 CRNKL1Q9BZJ0 848 aaKnown RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 MYH15Q9Y2K3 1946 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 PLSCR1O15162 318 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 FGRP09769 529 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 ZNF804AQ7Z570 1209 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 AIFM3Q96NN9 605 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 CRAMP1Q96RY5 1269 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 UBAC1Q9BSL1 405 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 FUCA2Q9BTY2 467 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 DCP1AQ9NPI6 582 aaPredicted RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
RPE-216ENST00000454822 ATP8A2Q9NTI2 1148 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
RPE-216ENST00000454822 BAZ2AQ9UIF9 1905 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 IGSF3O75054 1194 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 UFL1O94874 794 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 APBA3O96018 575 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 POLR3DP05423 398 aaPredicted RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 LDHBP07195 334 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 SEC23AQ15436 765 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 ZNF827Q17R98 1081 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 BICD2Q8TD16 824 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 NUP62CLQ9H1M0 184 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 RTEL1Q9NZ71 1219 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 GGA1Q9UJY5 639 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 NID2Q14112 1375 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 PCP11498 1178 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 IFNAR1P17181 557 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 SSRP1Q08945 709 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 GRIK5Q16478 980 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 CAMK4Q16566 473 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 RTN1Q16799 776 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 COL23A1Q86Y22 540 aaPredicted RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 FAM43AQ8N2R8 423 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 SLC26A6Q9BXS9 759 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 CD209Q9NNX6 404 aa10.3□□□□□ -0.76
RPE-216ENST00000454822 DDX19AQ9NUU7 478 aaKnown RBP10.3□□□□□ -0.76
RPE-216ENST00000454822 CCDC88AQ3V6T2 1871 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 NR1I2O75469 434 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 PRDM1O75626 825 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
RPE-216ENST00000454822 EVX2Q03828 476 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 MAP3K11Q16584 847 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 SBK1Q52WX2 424 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 KRT40Q6A162 431 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 ZNF654Q8IZM8 581 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 FANCBQ8NB91 859 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
RPE-216ENST00000454822 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
RPE-216ENST00000454822 PODXL2Q9NZ53 605 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 TNKSO95271 1327 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 STK36Q9NRP7 1315 aa10.29□□□□□ -0.76
RPE-216ENST00000454822 MYH2Q9UKX2 1941 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 CYP2D6P10635 497 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 IL1R1P14778 569 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 RCAN1P53805 252 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 GSTO1P78417 241 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 CCAR1Q8IX12 1150 aaKnown RBP10.28□□□□□ -0.76
RPE-216ENST00000454822 ENAHQ8N8S7 591 aaPredicted RBP10.28□□□□□ -0.76
RPE-216ENST00000454822 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
RPE-216ENST00000454822 NUP133Q8WUM0 1156 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms