RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 OSBPL3Q9H4L5 887 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 FLT4P35916 1363 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 AATKQ6ZMQ8 1374 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 MTIF2P46199 727 aaKnown RBP10.37□□□□□ -0.75
SMC6-207ENST00000448223 PPP1R7Q15435 360 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 SLFNL1Q499Z3 407 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 PHLDB3Q6NSJ2 640 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 MMS22LQ6ZRQ5 1243 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 CCDC65Q8IXS2 484 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 AOPEPQ8N6M6 819 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 USP6NLQ92738 828 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 NRBP1Q9UHY1 535 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 PYCARDQ9ULZ3 195 aa10.37□□□□□ -0.75
SMC6-207ENST00000448223 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
SMC6-207ENST00000448223 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 Q6ZUG5 572 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 NCAPGQ9BPX3 1015 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 POLE2P56282 527 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 CUL4AQ13619 759 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 TSG101Q99816 390 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 NUF2Q9BZD4 464 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 TPCN1Q9ULQ1 816 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 GRM8O00222 908 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 OPHN1O60890 802 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 PPFIA4O75335 1185 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 CHGBP05060 677 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 VPS41P49754 854 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 KRT83P78385 493 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
SMC6-207ENST00000448223 HSP90AA5PQ58FG0 334 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
SMC6-207ENST00000448223 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 XAB2Q9HCS7 855 aaKnown RBP10.36□□□□□ -0.75
SMC6-207ENST00000448223 NKIRAS1Q9NYS0 192 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 TBC1D2BQ9UPU7 963 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 E7EVH7 732 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 NFATC2IPQ8NCF5 419 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 EAF2Q96CJ1 260 aaPredicted RBP10.36□□□□□ -0.75
SMC6-207ENST00000448223 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
SMC6-207ENST00000448223 FRMPD1Q5SYB0 1578 aa10.36□□□□□ -0.75
SMC6-207ENST00000448223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.35□□□□□ -0.75
SMC6-207ENST00000448223 TTC6Q86TZ1 520 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 BCAS4Q8TDM0 211 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 TSC22D3Q99576 134 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC6-207ENST00000448223 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
SMC6-207ENST00000448223 TIMM10P62072 90 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 TMED1Q13445 227 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 SUCLG2Q96I99 432 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 KIF5AQ12840 1032 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
SMC6-207ENST00000448223 THEMISQ8N1K5 641 aaPredicted RBP10.35□□□□□ -0.75
SMC6-207ENST00000448223 C8orf76Q96K31 380 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 UTP14AQ9BVJ6 771 aaKnown RBP10.35□□□□□ -0.75
SMC6-207ENST00000448223 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 CTNNA2P26232 953 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 ACTN2P35609 894 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 E2F5Q15329 346 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 MTMR6Q9Y217 621 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 STK38LQ9Y2H1 464 aa10.35□□□□□ -0.75
SMC6-207ENST00000448223 TTC36A6NLP5 189 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 MYO1CO00159 1063 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 GMNNO75496 209 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 TRIM21P19474 475 aaKnown RBP10.34□□□□□ -0.75
SMC6-207ENST00000448223 RXRAP19793 462 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 HNRNPH2P55795 449 aaKnown RBP10.34□□□□□ -0.75
SMC6-207ENST00000448223 CCDC102BQ68D86 513 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 ARMC2Q8NEN0 867 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 SSH3Q8TE77 659 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 GUCA1BQ9UMX6 200 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 CPSF1Q10570 1443 aaKnown RBP10.34□□□□□ -0.75
SMC6-207ENST00000448223 NLRP5P59047 1200 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 GNGT1P63211 74 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 TFCP2Q12800 502 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 UBLCP1Q8WVY7 318 aaPredicted RBP10.34□□□□□ -0.75
SMC6-207ENST00000448223 RGS12O14924 1447 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 MGEA5O60502 916 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 MAP3K5Q99683 1374 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 SLC27A2O14975 620 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 ZNF131P52739 623 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 KSR2Q6VAB6 950 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 RUFY4Q6ZNE9 571 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 ARMC9Q7Z3E5 817 aa10.34□□□□□ -0.75
SMC6-207ENST00000448223 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
SMC6-207ENST00000448223 ATP2A2P16615 1042 aaKnown RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 CABP4P57796 275 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 SATB1Q01826 763 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 BRD3Q15059 726 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 PTPN21Q16825 1174 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 LMBR1LQ6UX01 489 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms