RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 EXOSC10Q01780 885 aaKnown RBP29.48■■■□□ 2.31
RFFL-206ENST00000447669 RSBN1LQ6PCB5 846 aaPredicted RBP29.48■■■□□ 2.31
RFFL-206ENST00000447669 ARHGAP27Q6ZUM4 889 aa29.48■■■□□ 2.31
RFFL-206ENST00000447669 JDP2Q8WYK2 163 aa29.48■■■□□ 2.31
RFFL-206ENST00000447669 VIL1P09327 827 aaKnown RBP29.47■■■□□ 2.31
RFFL-206ENST00000447669 MB21D2Q8IYB1 491 aaPredicted RBP29.47■■■□□ 2.31
RFFL-206ENST00000447669 RRP12Q5JTH9 1297 aaKnown RBP29.47■■■□□ 2.31
RFFL-206ENST00000447669 HHIPL2Q6UWX4 724 aa29.47■■■□□ 2.31
RFFL-206ENST00000447669 CYB5R4Q7L1T6 521 aa29.47■■■□□ 2.31
RFFL-206ENST00000447669 NCOA7Q8NI08 942 aa29.47■■■□□ 2.31
RFFL-206ENST00000447669 TPCN1Q9ULQ1 816 aa29.47■■■□□ 2.31
RFFL-206ENST00000447669 HSP90AA1P07900 732 aaKnown RBP29.46■■■□□ 2.31
RFFL-206ENST00000447669 ANTXR2P58335 489 aa29.46■■■□□ 2.31
RFFL-206ENST00000447669 AKNAD1Q5T1N1 836 aa29.46■■■□□ 2.31
RFFL-206ENST00000447669 USP40Q9NVE5 1235 aa29.46■■■□□ 2.31
RFFL-206ENST00000447669 PICALMQ13492 652 aa29.45■■■□□ 2.31
RFFL-206ENST00000447669 GIMAP6Q6P9H5 292 aa29.45■■■□□ 2.31
RFFL-206ENST00000447669 TOMM22Q9NS69 142 aa29.45■■■□□ 2.31
RFFL-206ENST00000447669 PRDM1O75626 825 aa29.45■■■□□ 2.3
RFFL-206ENST00000447669 MCM2P49736 904 aa29.45■■■□□ 2.3
RFFL-206ENST00000447669 CACNB3P54284 484 aa29.45■■■□□ 2.3
RFFL-206ENST00000447669 CDC42EP5Q6NZY7 148 aa29.45■■■□□ 2.3
RFFL-206ENST00000447669 RALYLQ86SE5 291 aaKnown RBP29.45■■■□□ 2.3
RFFL-206ENST00000447669 LIMCH1Q9UPQ0 1083 aa29.45■■■□□ 2.3
RFFL-206ENST00000447669 MFSD6Q6ZSS7 791 aa29.44■■■□□ 2.3
RFFL-206ENST00000447669 DDX4Q9NQI0 724 aaKnown RBP29.44■■■□□ 2.3
RFFL-206ENST00000447669 NAV1Q8NEY1 1877 aa29.44■■■□□ 2.3
RFFL-206ENST00000447669 HMGB1P09429 215 aaKnown RBP29.44■■■□□ 2.3
RFFL-206ENST00000447669 YBX3P16989 372 aaKnown RBP eCLIP29.44■■■□□ 2.3
RFFL-206ENST00000447669 BRF1Q92994 677 aa29.44■■■□□ 2.3
RFFL-206ENST00000447669 GMLQ99445 158 aa29.44■■■□□ 2.3
RFFL-206ENST00000447669 FLT1P17948 1338 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 LTBP3Q9NS15 1303 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 SHTN1A0MZ66 631 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 PRC1O43663 620 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 TRDNQ13061 729 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 ME3Q16798 604 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 STAG1Q8WVM7 1258 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 ZDHHC15Q96MV8 337 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 TIAM2Q8IVF5 1701 aa29.43■■■□□ 2.3
RFFL-206ENST00000447669 KDM4AO75164 1064 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 PLCD1P51178 756 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 DYNLL2Q96FJ2 89 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 ANAPC4Q9UJX5 808 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 WDHD1O75717 1129 aaPredicted RBP29.42■■■□□ 2.3
RFFL-206ENST00000447669 PLCG2P16885 1265 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 FGD1P98174 961 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 NECAB1Q8N987 351 aa29.42■■■□□ 2.3
RFFL-206ENST00000447669 LAMB1P07942 1786 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 NFIAQ12857 509 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 STK3Q13188 491 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 CFAP100Q494V2 611 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 CIAPIN1Q6FI81 312 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 ZSWIM5Q9P217 1185 aa29.41■■■□□ 2.3
RFFL-206ENST00000447669 MYH1P12882 1939 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 MCM5P33992 734 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 APOBRQ0VD83 1088 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 PRMT6Q96LA8 375 aaPredicted RBP29.4■■■□□ 2.3
RFFL-206ENST00000447669 ARPP21Q9UBL0 812 aaPredicted RBP29.4■■■□□ 2.3
RFFL-206ENST00000447669 SERPINA10Q9UK55 444 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 ZKSCAN3Q9BRR0 538 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 ALDH8A1Q9H2A2 487 aaPredicted RBP29.4■■■□□ 2.3
RFFL-206ENST00000447669 FOCADQ5VW36 1801 aa29.4■■■□□ 2.3
RFFL-206ENST00000447669 ECM29Q5VYK3 1845 aa29.39■■■□□ 2.3
RFFL-206ENST00000447669 ST3GAL1Q11201 340 aa29.39■■■□□ 2.3
RFFL-206ENST00000447669 SBK1Q52WX2 424 aa29.39■■■□□ 2.3
RFFL-206ENST00000447669 C12orf60Q5U649 245 aa29.39■■■□□ 2.3
RFFL-206ENST00000447669 TDRD3Q9H7E2 651 aaKnown RBP29.39■■■□□ 2.3
RFFL-206ENST00000447669 SENP2Q9HC62 589 aa29.39■■■□□ 2.3
RFFL-206ENST00000447669 ZFPM1Q8IX07 1006 aa29.38■■■□□ 2.29
RFFL-206ENST00000447669 MRIQ9BWK5 157 aa29.38■■■□□ 2.29
RFFL-206ENST00000447669 POLR3DP05423 398 aaPredicted RBP29.38■■■□□ 2.29
RFFL-206ENST00000447669 HDLBPQ00341 1268 aaKnown RBP29.38■■■□□ 2.29
RFFL-206ENST00000447669 CCDC83Q8IWF9 413 aa29.38■■■□□ 2.29
RFFL-206ENST00000447669 CUL4AQ13619 759 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 CERS3Q8IU89 383 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 SLC44A5Q8NCS7 719 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 MYO3BQ8WXR4 1341 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 TCP10Q12799 353 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 GJA3Q9Y6H8 435 aa29.37■■■□□ 2.29
RFFL-206ENST00000447669 ZNF541Q9H0D2 1346 aa29.36■■■□□ 2.29
RFFL-206ENST00000447669 SLURP2P0DP57 97 aa29.36■■■□□ 2.29
RFFL-206ENST00000447669 ANKRD1Q15327 319 aa29.36■■■□□ 2.29
RFFL-206ENST00000447669 RAB11FIP4Q86YS3 637 aa29.36■■■□□ 2.29
RFFL-206ENST00000447669 DDX60LQ5H9U9 1706 aaKnown RBP29.36■■■□□ 2.29
RFFL-206ENST00000447669 SBF1O95248 1867 aa29.35■■■□□ 2.29
RFFL-206ENST00000447669 FZD9O00144 591 aa29.35■■■□□ 2.29
RFFL-206ENST00000447669 AGXT2Q9BYV1 514 aa29.35■■■□□ 2.29
RFFL-206ENST00000447669 KRT23Q9C075 422 aa29.35■■■□□ 2.29
RFFL-206ENST00000447669 NAP1L2Q9ULW6 460 aaPredicted RBP29.35■■■□□ 2.29
RFFL-206ENST00000447669 RNF41Q9H4P4 317 aaPredicted RBP29.35■■■□□ 2.29
RFFL-206ENST00000447669 CNNM2Q9H8M5 875 aa29.35■■■□□ 2.29
RFFL-206ENST00000447669 RANBP6O60518 1105 aaKnown RBP29.34■■■□□ 2.29
RFFL-206ENST00000447669 FAM47AQ5JRC9 791 aa29.34■■■□□ 2.29
RFFL-206ENST00000447669 AGBL3Q8NEM8 1001 aa29.34■■■□□ 2.29
RFFL-206ENST00000447669 BRPF3Q9ULD4 1205 aa29.34■■■□□ 2.29
RFFL-206ENST00000447669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.34■■■□□ 2.29
RFFL-206ENST00000447669 OGFOD1Q8N543 542 aa29.33■■■□□ 2.29
RFFL-206ENST00000447669 DDIT3P35638 169 aa29.33■■■□□ 2.29
RFFL-206ENST00000447669 IGDCC4Q8TDY8 1250 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms