RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 WDR66Q8TBY9 1149 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 USP28Q96RU2 1077 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 UBAC1Q9BSL1 405 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 DACT1Q9NYF0 836 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 ALG1Q9BT22 464 aa22.74■■□□□ 1.23
FAM3A-215ENST00000447601 STK36Q9NRP7 1315 aa22.74■■□□□ 1.23
FAM3A-215ENST00000447601 IARSP41252 1262 aaKnown RBP22.73■■□□□ 1.23
FAM3A-215ENST00000447601 CEBPZQ03701 1054 aaKnown RBP22.73■■□□□ 1.23
FAM3A-215ENST00000447601 MAP3K11Q16584 847 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 UVSSAQ2YD98 709 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 OTUD7BQ6GQQ9 843 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 DZIP1Q86YF9 867 aaKnown RBP22.73■■□□□ 1.23
FAM3A-215ENST00000447601 FUCA2Q9BTY2 467 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 NTRK3Q16288 839 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 TDRD7Q8NHU6 1098 aaKnown RBP22.73■■□□□ 1.23
FAM3A-215ENST00000447601 PDLIM2Q96JY6 352 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 MYL10Q9BUA6 226 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 ATP8A2Q9NTI2 1148 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 FAM217BQ9NTX9 383 aaPredicted RBP22.73■■□□□ 1.23
FAM3A-215ENST00000447601 RTEL1Q9NZ71 1219 aa22.73■■□□□ 1.23
FAM3A-215ENST00000447601 ATP2B4P23634 1241 aa22.72■■□□□ 1.23
FAM3A-215ENST00000447601 STK11IPQ8N1F8 1099 aa22.72■■□□□ 1.23
FAM3A-215ENST00000447601 CLSTN2Q9H4D0 955 aa22.72■■□□□ 1.23
FAM3A-215ENST00000447601 RTN4Q9NQC3 1192 aaKnown RBP22.72■■□□□ 1.23
FAM3A-215ENST00000447601 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.23
FAM3A-215ENST00000447601 CCDC196A0A1B0GTZ2 297 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 POLRMTO00411 1230 aaKnown RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 BBOX1O75936 387 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 CCDC192P0DO97 292 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 KIF23Q02241 960 aaPredicted RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 CTR9Q6PD62 1173 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 WASF1Q92558 559 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 ZKSCAN3Q9BRR0 538 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 FTOQ9C0B1 505 aaKnown RBP eCLIP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 TNMDQ9H2S6 317 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 MAST2Q6P0Q8 1798 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 LDHBP07195 334 aaKnown RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 FGRP09769 529 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 IFNAR1P17181 557 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 HOXA10P31260 410 aaPredicted RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 GPSM2P81274 684 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 DDR1Q08345 913 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 SSRP1Q08945 709 aaKnown RBP22.71■■□□□ 1.23
FAM3A-215ENST00000447601 PHKBQ93100 1093 aa22.71■■□□□ 1.23
FAM3A-215ENST00000447601 RANBP6O60518 1105 aaKnown RBP22.7■■□□□ 1.22
FAM3A-215ENST00000447601 TRIM29Q14134 588 aa22.7■■□□□ 1.22
FAM3A-215ENST00000447601 RTN1Q16799 776 aa22.7■■□□□ 1.22
FAM3A-215ENST00000447601 ZNF772Q68DY9 489 aaPredicted RBP22.7■■□□□ 1.22
FAM3A-215ENST00000447601 PROM2Q8N271 834 aa22.7■■□□□ 1.22
FAM3A-215ENST00000447601 ARPP21Q9UBL0 812 aaPredicted RBP22.7■■□□□ 1.22
FAM3A-215ENST00000447601 TNKSO95271 1327 aa22.7■■□□□ 1.22
FAM3A-215ENST00000447601 USP17L12C9JPN9 530 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 USP17L21D6R901 530 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 FMNL1O95466 1100 aaPredicted RBP22.69■■□□□ 1.22
FAM3A-215ENST00000447601 GSTO1P78417 241 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 MYSM1Q5VVJ2 828 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 CRAMP1Q96RY5 1269 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 DCP1AQ9NPI6 582 aaPredicted RBP22.69■■□□□ 1.22
FAM3A-215ENST00000447601 POLR3EQ9NVU0 708 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 GGA1Q9UJY5 639 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 BRWD3Q6RI45 1802 aa22.69■■□□□ 1.22
FAM3A-215ENST00000447601 KLRG2A4D1S0 409 aaPredicted RBP22.68■■□□□ 1.22
FAM3A-215ENST00000447601 NR1I2O75469 434 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 UFL1O94874 794 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 YEATS4O95619 227 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 SLC3A2P08195 630 aaKnown RBP22.68■■□□□ 1.22
FAM3A-215ENST00000447601 PPP2R5BQ15173 497 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 SEC23AQ15436 765 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 TRIM22Q8IYM9 498 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 ZNF654Q8IZM8 581 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 DUOX1Q9NRD9 1551 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 JAG2Q9Y219 1238 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 CHD4Q14839 1912 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 POLR3DP05423 398 aaPredicted RBP22.68■■□□□ 1.22
FAM3A-215ENST00000447601 ME1P48163 572 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 SBK1Q52WX2 424 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 KRT40Q6A162 431 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 RBM43Q6ZSC3 357 aaKnown RBP22.68■■□□□ 1.22
FAM3A-215ENST00000447601 TMC4Q7Z404 712 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 IQCA1Q86XH1 822 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 KCNG4Q8TDN1 519 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 ZSCAN10Q96SZ4 725 aaPredicted RBP22.68■■□□□ 1.22
FAM3A-215ENST00000447601 SLC26A6Q9BXS9 759 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 GJB4Q9NTQ9 266 aa22.68■■□□□ 1.22
FAM3A-215ENST00000447601 CYP2D7A0A087X1C5 515 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 ORC4O43929 436 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 CAMK4Q16566 473 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 CCDC73Q6ZRK6 1079 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 SLC51AQ86UW1 340 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 CCAR1Q8IX12 1150 aaKnown RBP22.67■■□□□ 1.22
FAM3A-215ENST00000447601 AIFM3Q96NN9 605 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
FAM3A-215ENST00000447601 MYH13Q9UKX3 1938 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 KIF28PB7ZC32 967 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 PLSCR1O15162 318 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 HS1BP3Q53T59 392 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 FANCBQ8NB91 859 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 LINC00301Q8NCQ3 95 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms