RNA–Protein interactions for RNA: ENST00000444490.6

ECM2-204, Transcript of extracellular matrix protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECM2, Length 2,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-204ENST00000444490 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
ECM2-204ENST00000444490 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 USP17L21D6R901 530 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 BRD1O95696 1058 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 ME3Q16798 604 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
ECM2-204ENST00000444490 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 TPCN1Q9ULQ1 816 aa13.25□□□□□ -0.29
ECM2-204ENST00000444490 KRT32Q14532 448 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 TSGA10IPQ3SY00 556 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 ZSCAN31Q96LW9 406 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 ARFGEF1Q9Y6D6 1849 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 NEDD4P46934 1319 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 PRDM1O75626 825 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 BAG3O95817 575 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 PTMSP20962 102 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 RHBDL3P58872 404 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 FOXD4L6Q3SYB3 417 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 FOXD4L3Q6VB84 417 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 TEKT1Q969V4 418 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 NEK1Q96PY6 1258 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 SH2B1Q9NRF2 756 aaPredicted RBP13.24□□□□□ -0.29
ECM2-204ENST00000444490 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
ECM2-204ENST00000444490 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 SLURP2P0DP57 97 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 GNAT2P19087 354 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 GAKO14976 1311 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 B4E1Z4 1266 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
ECM2-204ENST00000444490 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
ECM2-204ENST00000444490 ZBTB22O15209 634 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 PPARAQ07869 468 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 ST3GAL1Q11201 340 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 TCP10Q12799 353 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 APOBEC3HQ6NTF7 200 aaKnown RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 NFIAQ12857 509 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 STK3Q13188 491 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 ALX1Q15699 326 aa13.22□□□□□ -0.29
ECM2-204ENST00000444490 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
ECM2-204ENST00000444490 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
ECM2-204ENST00000444490 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 SOCS7O14512 581 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.29
ECM2-204ENST00000444490 GJB2P29033 226 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 PPP4CP60510 307 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 GPR162Q16538 588 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 ZFPM1Q8IX07 1006 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 SLF2Q8IX21 1173 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
ECM2-204ENST00000444490 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
ECM2-204ENST00000444490 EGFRP00533 1210 aa13.21□□□□□ -0.3
ECM2-204ENST00000444490 Q6ZUG5 572 aa13.21□□□□□ -0.3
ECM2-204ENST00000444490 CYB5R4Q7L1T6 521 aa13.21□□□□□ -0.3
ECM2-204ENST00000444490 SLC44A5Q8NCS7 719 aa13.21□□□□□ -0.3
ECM2-204ENST00000444490 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.3
ECM2-204ENST00000444490 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
ECM2-204ENST00000444490 PLCD1P51178 756 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 FGD1P98174 961 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 FAM163AQ96GL9 167 aaPredicted RBP13.2□□□□□ -0.3
ECM2-204ENST00000444490 GMLQ99445 158 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 RNF181Q9P0P0 153 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 FLT1P17948 1338 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
ECM2-204ENST00000444490 SYT1P21579 422 aa13.2□□□□□ -0.3
ECM2-204ENST00000444490 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
ECM2-204ENST00000444490 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
ECM2-204ENST00000444490 PSME4Q14997 1843 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 TCHHQ07283 1943 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 KDM4AO75164 1064 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
ECM2-204ENST00000444490 ANTXR2P58335 489 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 STX6O43752 255 aa13.19□□□□□ -0.3
ECM2-204ENST00000444490 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms