RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 AATFQ9NY61 560 aaKnown RBP eCLIP10.07□□□□□ -0.8
RER1-205ENST00000443438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.07□□□□□ -0.88e-6■■■□□ 18.6
RER1-205ENST00000443438 GOLGA8BA8MQT2 603 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 MINDY4BA8MYZ0 360 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 ALDH1B1P30837 517 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 SEC23AQ15436 765 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 NTRK3Q16288 839 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 GAS2L3Q86XJ1 694 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 RAB11FIP4Q86YS3 637 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 RTFDC1Q9BY42 306 aaPredicted RBP10.06□□□□□ -0.8
RER1-205ENST00000443438 CRNKL1Q9BZJ0 848 aaKnown RBP10.06□□□□□ -0.8
RER1-205ENST00000443438 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
RER1-205ENST00000443438 ATP8A2Q9NTI2 1148 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 STK32BQ9NY57 414 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
RER1-205ENST00000443438 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 QSER1Q2KHR3 1735 aa10.06□□□□□ -0.8
RER1-205ENST00000443438 MYH13Q9UKX3 1938 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 USP17L21D6R901 530 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 ORC4O43929 436 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 MBD3O95983 291 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 CYP2D6P10635 497 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 CDC27P30260 824 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 ZNF445P59923 1031 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 GSTO1P78417 241 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 FAM173BQ6P4H8 233 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 APOA5Q6Q788 366 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 FERMT3Q86UX7 667 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 DZIP1Q86YF9 867 aaKnown RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 MPNDQ8N594 471 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 FAM184AQ8NB25 1140 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 SH3RF3Q8TEJ3 882 aaPredicted RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 COA1Q9GZY4 146 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 TMEM63CQ9P1W3 806 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 NAP1L2Q9ULW6 460 aaPredicted RBP10.05□□□□□ -0.8
RER1-205ENST00000443438 MROH7-TTC4A0A0A0MT08 1334 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 GAKO14976 1311 aa10.05□□□□□ -0.8
RER1-205ENST00000443438 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 LDHCP07864 332 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 PCP11498 1178 aaKnown RBP10.04□□□□□ -0.8
RER1-205ENST00000443438 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
RER1-205ENST00000443438 TTC6Q86TZ1 520 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 STK11IPQ8N1F8 1099 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
RER1-205ENST00000443438 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
RER1-205ENST00000443438 ZBTB43O43298 467 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 RANBP6O60518 1105 aaKnown RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 METAP2P50579 478 aaKnown RBP eCLIP10.03□□□□□ -0.8
RER1-205ENST00000443438 RCAN1P53805 252 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 RHBDL3P58872 404 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 ZSCAN23Q3MJ62 389 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 DPP8Q6V1X1 898 aaPredicted RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 CERS5Q8N5B7 392 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 TBC1D22AQ8WUA7 517 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 ESR2Q92731 530 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 ZSCAN16Q9H4T2 348 aaPredicted RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 ORC3Q9UBD5 711 aaPredicted RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 ARPP21Q9UBL0 812 aaPredicted RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 ISY1Q9ULR0 285 aaKnown RBP10.03□□□□□ -0.8
RER1-205ENST00000443438 ELP1O95163 1332 aa10.03□□□□□ -0.8
RER1-205ENST00000443438 CCDC88AQ3V6T2 1871 aa10.02□□□□□ -0.8
RER1-205ENST00000443438 CHD4Q14839 1912 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 GOLGA6L3A6NEY3 463 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 GOLGA8AA7E2F4 631 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 H0YIN7 160 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 H3BQV1 296 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 FIBPO43427 364 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 BAG3O95817 575 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 XRCC6P12956 609 aaKnown RBP eCLIP10.02□□□□□ -0.81
RER1-205ENST00000443438 NCLP19338 710 aaKnown RBP10.02□□□□□ -0.81
RER1-205ENST00000443438 RXRAP19793 462 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 CHRNA5P30532 468 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 BTDP43251 543 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 UBE2HP62256 183 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 GTF2IP78347 998 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 KRT85P78386 507 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 WTAPQ15007 396 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 MFSD14BQ5SR56 506 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 OTUD7BQ6GQQ9 843 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 DEFB132Q7Z7B7 95 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 NBPF11Q86T75 865 aa10.02□□□□□ -0.81
RER1-205ENST00000443438 TMTC2Q8N394 836 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms