RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 CXCL9Q07325 125 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 AKNAD1Q5T1N1 836 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 LIMCH1Q9UPQ0 1083 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 PCDHAC2Q9Y5I4 1007 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 CUL4AQ13619 759 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 TEX11Q8IYF3 940 aa33.1■■■□□ 2.89
CGREF1-207ENST00000440612 MINDY4BA8MYZ0 360 aa33.09■■■□□ 2.89
CGREF1-207ENST00000440612 CYP2D6P10635 497 aa33.09■■■□□ 2.89
CGREF1-207ENST00000440612 SERPINA10Q9UK55 444 aa33.09■■■□□ 2.89
CGREF1-207ENST00000440612 DDX60LQ5H9U9 1706 aaKnown RBP33.09■■■□□ 2.89
CGREF1-207ENST00000440612 MYO3BQ8WXR4 1341 aa33.09■■■□□ 2.89
CGREF1-207ENST00000440612 FGRP09769 529 aa33.08■■■□□ 2.89
CGREF1-207ENST00000440612 USP17L8P0C7I0 530 aa33.08■■■□□ 2.89
CGREF1-207ENST00000440612 USP5P45974 858 aa33.08■■■□□ 2.89
CGREF1-207ENST00000440612 FBXL16Q8N461 479 aa33.08■■■□□ 2.89
CGREF1-207ENST00000440612 LRRC2Q9BYS8 371 aa33.08■■■□□ 2.89
CGREF1-207ENST00000440612 ARPP21Q9UBL0 812 aaPredicted RBP33.08■■■□□ 2.89
CGREF1-207ENST00000440612 LARGE1O95461 756 aa33.07■■■□□ 2.89
CGREF1-207ENST00000440612 DDIT3P35638 169 aa33.07■■■□□ 2.89
CGREF1-207ENST00000440612 Q6ZUG5 572 aa33.07■■■□□ 2.89
CGREF1-207ENST00000440612 CHST3Q7LGC8 479 aa33.07■■■□□ 2.89
CGREF1-207ENST00000440612 TPCN1Q9ULQ1 816 aa33.07■■■□□ 2.89
CGREF1-207ENST00000440612 WDHD1O75717 1129 aaPredicted RBP33.07■■■□□ 2.88
CGREF1-207ENST00000440612 CDC42EP5Q6NZY7 148 aa33.07■■■□□ 2.88
CGREF1-207ENST00000440612 MAPKAPK5Q8IW41 473 aa33.07■■■□□ 2.88
CGREF1-207ENST00000440612 JDP2Q8WYK2 163 aa33.07■■■□□ 2.88
CGREF1-207ENST00000440612 MCM9Q9NXL9 1143 aa33.07■■■□□ 2.88
CGREF1-207ENST00000440612 FLT1P17948 1338 aa33.06■■■□□ 2.88
CGREF1-207ENST00000440612 C12orf60Q5U649 245 aa33.06■■■□□ 2.88
CGREF1-207ENST00000440612 CYB5R4Q7L1T6 521 aa33.06■■■□□ 2.88
CGREF1-207ENST00000440612 ZBTB12Q9Y330 459 aaPredicted RBP33.06■■■□□ 2.88
CGREF1-207ENST00000440612 WDR19Q8NEZ3 1342 aa33.06■■■□□ 2.88
CGREF1-207ENST00000440612 LAMB1P07942 1786 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 B4E1Z4 1266 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 MCM5P33992 734 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 ANKRD1Q15327 319 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 MFSD6Q6ZSS7 791 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 RALYLQ86SE5 291 aaKnown RBP33.05■■■□□ 2.88
CGREF1-207ENST00000440612 FOCADQ5VW36 1801 aa33.05■■■□□ 2.88
CGREF1-207ENST00000440612 NAV1Q8NEY1 1877 aa33.04■■■□□ 2.88
CGREF1-207ENST00000440612 USP40Q9NVE5 1235 aa33.04■■■□□ 2.88
CGREF1-207ENST00000440612 PRC1O43663 620 aa33.04■■■□□ 2.88
CGREF1-207ENST00000440612 TRDNQ13061 729 aa33.04■■■□□ 2.88
CGREF1-207ENST00000440612 ME3Q16798 604 aa33.04■■■□□ 2.88
CGREF1-207ENST00000440612 SLKQ9H2G2 1235 aaPredicted RBP33.04■■■□□ 2.88
CGREF1-207ENST00000440612 GPHNQ9NQX3 736 aaPredicted RBP33.04■■■□□ 2.88
CGREF1-207ENST00000440612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.04■■■□□ 2.88
CGREF1-207ENST00000440612 UTRNP46939 3433 aa33.03■■■□□ 2.88
CGREF1-207ENST00000440612 ST3GAL1Q11201 340 aa33.03■■■□□ 2.88
CGREF1-207ENST00000440612 CIAPIN1Q6FI81 312 aa33.03■■■□□ 2.88
CGREF1-207ENST00000440612 RNF41Q9H4P4 317 aaPredicted RBP33.03■■■□□ 2.88
CGREF1-207ENST00000440612 CNNM2Q9H8M5 875 aa33.03■■■□□ 2.88
CGREF1-207ENST00000440612 DDX4Q9NQI0 724 aaKnown RBP33.03■■■□□ 2.88
CGREF1-207ENST00000440612 FOXD4L1Q9NU39 408 aa33.03■■■□□ 2.88
CGREF1-207ENST00000440612 FZD9O00144 591 aa33.02■■■□□ 2.88
CGREF1-207ENST00000440612 STK11IPQ8N1F8 1099 aa33.02■■■□□ 2.88
CGREF1-207ENST00000440612 AGBL3Q8NEM8 1001 aa33.02■■■□□ 2.88
CGREF1-207ENST00000440612 BRF1Q92994 677 aa33.01■■■□□ 2.88
CGREF1-207ENST00000440612 ZSWIM5Q9P217 1185 aa33.01■■■□□ 2.88
CGREF1-207ENST00000440612 ROBO3Q96MS0 1386 aa33.01■■■□□ 2.88
CGREF1-207ENST00000440612 ZSCAN31Q96LW9 406 aaPredicted RBP33.01■■■□□ 2.87
CGREF1-207ENST00000440612 KRT23Q9C075 422 aa33.01■■■□□ 2.87
CGREF1-207ENST00000440612 KDM4AO75164 1064 aa33■■■□□ 2.87
CGREF1-207ENST00000440612 PLCD1P51178 756 aa33■■■□□ 2.87
CGREF1-207ENST00000440612 CFAP100Q494V2 611 aa33■■■□□ 2.87
CGREF1-207ENST00000440612 SAP30BPQ9UHR5 308 aaKnown RBP33■■■□□ 2.87
CGREF1-207ENST00000440612 PCP11498 1178 aaKnown RBP32.99■■■□□ 2.87
CGREF1-207ENST00000440612 YBX3P16989 372 aaKnown RBP eCLIP32.99■■■□□ 2.87
CGREF1-207ENST00000440612 EVCP57679 992 aa32.99■■■□□ 2.87
CGREF1-207ENST00000440612 ARHGAP27Q6ZUM4 889 aa32.99■■■□□ 2.87
CGREF1-207ENST00000440612 PRMT6Q96LA8 375 aaPredicted RBP32.99■■■□□ 2.87
CGREF1-207ENST00000440612 SH2B1Q9NRF2 756 aaPredicted RBP32.99■■■□□ 2.87
CGREF1-207ENST00000440612 NFIAQ12857 509 aa32.98■■■□□ 2.87
CGREF1-207ENST00000440612 SLC4A8Q2Y0W8 1093 aa32.98■■■□□ 2.87
CGREF1-207ENST00000440612 INTS4Q96HW7 963 aaKnown RBP32.98■■■□□ 2.87
CGREF1-207ENST00000440612 ORC4O43929 436 aa32.97■■■□□ 2.87
CGREF1-207ENST00000440612 IGDCC4Q8TDY8 1250 aa32.97■■■□□ 2.87
CGREF1-207ENST00000440612 ECM29Q5VYK3 1845 aa32.97■■■□□ 2.87
CGREF1-207ENST00000440612 HSP90AA1P07900 732 aaKnown RBP32.97■■■□□ 2.87
CGREF1-207ENST00000440612 RBM5P52756 815 aaKnown RBP eCLIP32.97■■■□□ 2.87
CGREF1-207ENST00000440612 APOBRQ0VD83 1088 aa32.96■■■□□ 2.87
CGREF1-207ENST00000440612 TNIP1Q15025 636 aa32.96■■■□□ 2.87
CGREF1-207ENST00000440612 RRP12Q5JTH9 1297 aaKnown RBP32.96■■■□□ 2.87
CGREF1-207ENST00000440612 DYNLL2Q96FJ2 89 aa32.96■■■□□ 2.87
CGREF1-207ENST00000440612 IDI2Q9BXS1 227 aa32.96■■■□□ 2.87
CGREF1-207ENST00000440612 SH2B2O14492 632 aaPredicted RBP32.95■■■□□ 2.87
CGREF1-207ENST00000440612 PRDM1O75626 825 aa32.95■■■□□ 2.87
CGREF1-207ENST00000440612 PICALMQ13492 652 aa32.95■■■□□ 2.87
CGREF1-207ENST00000440612 NECAB1Q8N987 351 aa32.95■■■□□ 2.87
CGREF1-207ENST00000440612 SPDYE2BA6NHP3 402 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 SPDYE6P0CI01 402 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 POLR3DP05423 398 aaPredicted RBP32.94■■■□□ 2.86
CGREF1-207ENST00000440612 LMNB1P20700 586 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 CACNB3P54284 484 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 FGD1P98174 961 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 MTMR14Q8NCE2 650 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 ZBED3Q96IU2 234 aaPredicted RBP32.94■■■□□ 2.86
CGREF1-207ENST00000440612 TMEM87BQ96K49 555 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 OSBPL5Q9H0X9 879 aaPredicted RBP32.94■■■□□ 2.86
CGREF1-207ENST00000440612 SENP2Q9HC62 589 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms