RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TUBE1Q9UJT0 475 aa15.3■□□□□ 0.04
ACTN1-204ENST00000438964 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 CCDC175P0C221 793 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 HSP90B2PQ58FF3 399 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
ACTN1-204ENST00000438964 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
ACTN1-204ENST00000438964 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 MAN1B1Q9UKM7 699 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 KCNJ14Q9UNX9 436 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 PXDNQ92626 1479 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 LRRC37A3O60309 1634 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 MICALL1Q8N3F8 863 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
ACTN1-204ENST00000438964 ABCC6O95255 1503 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 ATP8B1O43520 1251 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 STX10O60499 249 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 APPP05067 770 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
ACTN1-204ENST00000438964 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-204ENST00000438964 KIF5CO60282 957 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 CASP14P31944 242 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 LIG3P49916 1009 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 GOLGA6L1Q8N7Z2 621 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 IGSF22Q8N9C0 903 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 PUS7LQ9H0K6 701 aaKnown RBP15.28■□□□□ 0.04
ACTN1-204ENST00000438964 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
ACTN1-204ENST00000438964 A0A1B0GUL7 405 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 ADORA1P30542 326 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-204ENST00000438964 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 EFCC1Q9HA90 598 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 COPRSQ9NQ92 184 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 FOXP2O15409 715 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 HOXB7P09629 217 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 SCARF1Q14162 830 aa15.27■□□□□ 0.04
ACTN1-204ENST00000438964 PLEKHO1Q53GL0 409 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-204ENST00000438964 EEF2KMTQ96G04 330 aa15.27■□□□□ 0.03
ACTN1-204ENST00000438964 CDC23Q9UJX2 597 aa15.27■□□□□ 0.03
ACTN1-204ENST00000438964 PTPRUQ92729 1446 aa15.27■□□□□ 0.03
ACTN1-204ENST00000438964 BTBD18B2RXH4 712 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-204ENST00000438964 RNF40O75150 1001 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 TUBB4AP04350 444 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 BRD3Q15059 726 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 PTPAQ15257 358 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 DSCC1Q9BVC3 393 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 HDAC5Q9UQL6 1122 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 AKR1B15C9JRZ8 316 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-204ENST00000438964 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
ACTN1-204ENST00000438964 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 DHX8Q14562 1220 aaKnown RBP15.26■□□□□ 0.03
ACTN1-204ENST00000438964 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 NFXL1Q6ZNB6 911 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
ACTN1-204ENST00000438964 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-204ENST00000438964 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
ACTN1-204ENST00000438964 IMMTQ16891 758 aaKnown RBP15.25■□□□□ 0.03
ACTN1-204ENST00000438964 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 SLC26A6Q9BXS9 759 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 NALCNQ8IZF0 1738 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 B4E1Z4 1266 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■□□ 17.8
ACTN1-204ENST00000438964 HDGFP51858 240 aaKnown RBP15.25■□□□□ 0.03
ACTN1-204ENST00000438964 POSTNQ15063 836 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 ZKSCAN3Q9BRR0 538 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 METTL22Q9BUU2 404 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-204ENST00000438964 RICTORQ6R327 1708 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 PES1O00541 588 aaKnown RBP15.25■□□□□ 0.03
ACTN1-204ENST00000438964 MAGEA9P43362 315 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 NR5A1Q13285 461 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 EP400NLQ6ZTU2 488 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 CYB5R4Q7L1T6 521 aa15.25■□□□□ 0.03
ACTN1-204ENST00000438964 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-204ENST00000438964 NCAPD2Q15021 1401 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 EIF3JO75822 258 aaKnown RBP15.24■□□□□ 0.03
ACTN1-204ENST00000438964 KCTD19Q17RG1 926 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-204ENST00000438964 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
ACTN1-204ENST00000438964 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 FBXW10Q5XX13 1052 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 NEO1Q92859 1461 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 PIK3C2AO00443 1686 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 CTAGE15A4D2H0 777 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 IVLP07476 585 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms