RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 LARGE1O95461 756 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 CHAF1AQ13111 956 aaPredicted RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 ME3Q16798 604 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 DPP8Q6V1X1 898 aaPredicted RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
LINC00858-202ENST00000437892 TBC1D10CQ8IV04 446 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 STAG1Q8WVM7 1258 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
LINC00858-202ENST00000437892 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
LINC00858-202ENST00000437892 A0A0G2JLW4 131 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 APPP05067 770 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 MCM5P33992 734 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 PPP4CP60510 307 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 Q6ZUG5 572 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
LINC00858-202ENST00000437892 GBP4Q96PP9 640 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 CRNKL1Q9BZJ0 848 aaKnown RBP11.32□□□□□ -0.6
LINC00858-202ENST00000437892 RNF41Q9H4P4 317 aaPredicted RBP11.32□□□□□ -0.6
LINC00858-202ENST00000437892 CHD4Q14839 1912 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 SLX4Q8IY92 1834 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 MROH7-TTC4A0A0A0MT08 1334 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 GAKO14976 1311 aa11.32□□□□□ -0.6
LINC00858-202ENST00000437892 NID2Q14112 1375 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 PFKFB2O60825 505 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 BRD1O95696 1058 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 LDHCP07864 332 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 PTMSP20962 102 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 TDO2P48775 406 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 HAND2P61296 217 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 TRDNQ13061 729 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 ZNF274Q96GC6 653 aaPredicted RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
LINC00858-202ENST00000437892 KRT23Q9C075 422 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 ATP8A2Q9NTI2 1148 aa11.31□□□□□ -0.6
LINC00858-202ENST00000437892 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 PRC1O43663 620 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 PRKAB2O43741 272 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 FGRP09769 529 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 ANTXR2P58335 489 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 AKNAD1Q5T1N1 836 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 SUPT20HQ8NEM7 779 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 BRF1Q92994 677 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 ZNF622Q969S3 477 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00858-202ENST00000437892 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
LINC00858-202ENST00000437892 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
LINC00858-202ENST00000437892 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 NEDD4P46934 1319 aa11.3□□□□□ -0.6
LINC00858-202ENST00000437892 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
LINC00858-202ENST00000437892 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 BAG3O95817 575 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 MCM4P33991 863 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 RCAN1P53805 252 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 PPARAQ07869 468 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 CCDC83Q8IWF9 413 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
LINC00858-202ENST00000437892 MTFR1LQ9H019 292 aa11.29□□□□□ -0.6
LINC00858-202ENST00000437892 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
LINC00858-202ENST00000437892 PSME4Q14997 1843 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
LINC00858-202ENST00000437892 PDCP20941 246 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 CHRNA5P30532 468 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 LIFRP42702 1097 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
LINC00858-202ENST00000437892 FGD1P98174 961 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 SMARCC2Q8TAQ2 1214 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 SDR42E1Q8WUS8 393 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 PSMD1Q99460 953 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
LINC00858-202ENST00000437892 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
LINC00858-202ENST00000437892 DCP1AQ9NPI6 582 aaPredicted RBP11.28□□□□□ -0.6
LINC00858-202ENST00000437892 AATFQ9NY61 560 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms