RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 MKRN1Q9UHC7 482 aaKnown RBP25.38■■□□□ 1.65
YBX1-203ENST00000436427 SAP30BPQ9UHR5 308 aaKnown RBP25.38■■□□□ 1.65
YBX1-203ENST00000436427 ZC3H4Q9UPT8 1303 aaKnown RBP25.38■■□□□ 1.65
YBX1-203ENST00000436427 LAMA4Q16363 1823 aa25.38■■□□□ 1.65
YBX1-203ENST00000436427 FOCADQ5VW36 1801 aa25.38■■□□□ 1.65
YBX1-203ENST00000436427 MYO1BO43795 1136 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 PPARAQ07869 468 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 KRT32Q14532 448 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 SAMD7Q7Z3H4 446 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 AMOTL1Q8IY63 956 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 JAKMIP1Q96N16 626 aaKnown RBP25.37■■□□□ 1.65
YBX1-203ENST00000436427 DDX4Q9NQI0 724 aaKnown RBP25.37■■□□□ 1.65
YBX1-203ENST00000436427 TMOD2Q9NZR1 351 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 CYP2D7A0A087X1C5 515 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 CLRN2A0PK11 232 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 CTDSPL2Q05D32 466 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 NFIAQ12857 509 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 ADCK5Q3MIX3 580 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 TSGA10IPQ3SY00 556 aa25.37■■□□□ 1.65
YBX1-203ENST00000436427 TBC1D10BQ4KMP7 808 aaPredicted RBP25.37■■□□□ 1.65
YBX1-203ENST00000436427 WNT10BO00744 389 aa25.36■■□□□ 1.65
YBX1-203ENST00000436427 EGFRP00533 1210 aa25.36■■□□□ 1.65
YBX1-203ENST00000436427 LMOD1P29536 600 aaPredicted RBP25.36■■□□□ 1.65
YBX1-203ENST00000436427 NBPF9Q3BBW0 867 aa25.36■■□□□ 1.65
YBX1-203ENST00000436427 IL17RAQ96F46 866 aa25.36■■□□□ 1.65
YBX1-203ENST00000436427 ZBED3Q96IU2 234 aaPredicted RBP25.36■■□□□ 1.65
YBX1-203ENST00000436427 IPO9Q96P70 1041 aaKnown RBP25.36■■□□□ 1.65
YBX1-203ENST00000436427 ZNF70Q9UC06 446 aaPredicted RBP25.36■■□□□ 1.65
YBX1-203ENST00000436427 E7EWF7 191 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 POLR3DP05423 398 aaPredicted RBP25.35■■□□□ 1.65
YBX1-203ENST00000436427 CYP2D6P10635 497 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 RABEP1Q15276 862 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 KIF4BQ2VIQ3 1234 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 SBK1Q52WX2 424 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 STOX1Q6ZVD7 989 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 TBC1D10CQ8IV04 446 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 STK11IPQ8N1F8 1099 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 IDI2Q9BXS1 227 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 NBPF3Q9H094 633 aa25.35■■□□□ 1.65
YBX1-203ENST00000436427 LAMB1P07942 1786 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 CASTP20810 708 aaKnown RBP25.34■■□□□ 1.65
YBX1-203ENST00000436427 PSMA5P28066 241 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 EPS15P42566 896 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 TCP10Q12799 353 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 SPDYE2Q495Y8 402 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 OSBPL5Q9H0X9 879 aaPredicted RBP25.34■■□□□ 1.65
YBX1-203ENST00000436427 VEZTQ9HBM0 779 aa25.34■■□□□ 1.65
YBX1-203ENST00000436427 DDX60LQ5H9U9 1706 aaKnown RBP25.34■■□□□ 1.65
YBX1-203ENST00000436427 UPF3BQ9BZI7 483 aaKnown RBP25.33■■□□□ 1.65
YBX1-203ENST00000436427 C12orf60Q5U649 245 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 NEK1Q96PY6 1258 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 FAM198AQ9UFP1 575 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 ANAPC4Q9UJX5 808 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 MYH1P12882 1939 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 GLTPD2A6NH11 291 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 TCP10L2B9ZVM9 353 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 SMIM22K7EJ46 135 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 SLC3A2P08195 630 aaKnown RBP25.32■■□□□ 1.64
YBX1-203ENST00000436427 EVX2Q03828 476 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 AKNAD1Q5T1N1 836 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 TM6SF1Q9BZW5 370 aa25.32■■□□□ 1.64
YBX1-203ENST00000436427 CPA1P15085 419 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 NEK4P51957 841 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 TRDNQ13061 729 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 BLOC1S2Q6QNY1 142 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 MFSD6Q6ZSS7 791 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 TRPM4Q8TD43 1214 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 RNF41Q9H4P4 317 aaPredicted RBP25.31■■□□□ 1.64
YBX1-203ENST00000436427 TOMM22Q9NS69 142 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 CYP46A1Q9Y6A2 500 aa25.31■■□□□ 1.64
YBX1-203ENST00000436427 NPM3O75607 178 aaKnown RBP25.3■■□□□ 1.64
YBX1-203ENST00000436427 PLCD1P51178 756 aa25.3■■□□□ 1.64
YBX1-203ENST00000436427 RALYLQ86SE5 291 aaKnown RBP25.3■■□□□ 1.64
YBX1-203ENST00000436427 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
YBX1-203ENST00000436427 STAG1Q8WVM7 1258 aa25.3■■□□□ 1.64
YBX1-203ENST00000436427 ZSWIM6Q9HCJ5 1215 aa25.3■■□□□ 1.64
YBX1-203ENST00000436427 INCENPQ9NQS7 918 aa25.3■■□□□ 1.64
YBX1-203ENST00000436427 NEDD4P46934 1319 aa25.29■■□□□ 1.64
YBX1-203ENST00000436427 ENTPD3O75355 529 aa25.29■■□□□ 1.64
YBX1-203ENST00000436427 RUFY3Q7L099 469 aa25.29■■□□□ 1.64
YBX1-203ENST00000436427 TTC6Q86TZ1 520 aa25.29■■□□□ 1.64
YBX1-203ENST00000436427 ZSCAN29Q8IWY8 852 aaPredicted RBP25.29■■□□□ 1.64
YBX1-203ENST00000436427 NCOA7Q8NI08 942 aa25.29■■□□□ 1.64
YBX1-203ENST00000436427 L3MBTL3Q96JM7 780 aaPredicted RBP25.29■■□□□ 1.64
YBX1-203ENST00000436427 RRP12Q5JTH9 1297 aaKnown RBP25.28■■□□□ 1.64
YBX1-203ENST00000436427 ADARB2Q9NS39 739 aaKnown RBP25.28■■□□□ 1.64
YBX1-203ENST00000436427 ST18O60284 1047 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 HLA-DOAP06340 250 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 HMGB1P09429 215 aaKnown RBP25.27■■□□□ 1.64
YBX1-203ENST00000436427 COL9A3Q14050 684 aaPredicted RBP25.27■■□□□ 1.64
YBX1-203ENST00000436427 DYNLL2Q96FJ2 89 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 DHX36Q9H2U1 1008 aaKnown RBP25.27■■□□□ 1.64
YBX1-203ENST00000436427 CNNM2Q9H8M5 875 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 TACC3Q9Y6A5 838 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 ASTN2O75129 1339 aaPredicted RBP25.27■■□□□ 1.64
YBX1-203ENST00000436427 RPS6KB1P23443 525 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 PDE4BQ07343 736 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 FKBP1CQ5VVH2 108 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 KRT23Q9C075 422 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 HACL1Q9UJ83 578 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms