RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 STYK1Q6J9G0 422 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 STK11IPQ8N1F8 1099 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 TBC1D22AQ8WUA7 517 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 ZSWIM5Q9P217 1185 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 H3BQV1 296 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
CALD1-207ENST00000430085 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 BAG3O95817 575 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 CDC37L1Q7L3B6 337 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 COA1Q9GZY4 146 aa16.78■□□□□ 0.28
CALD1-207ENST00000430085 CPLX1O14810 134 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 CHRNA5P30532 468 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 NKX2-3Q8TAU0 364 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
CALD1-207ENST00000430085 ERICH2A1L162 156 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 ESR2Q92731 530 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 EYA3Q99504 573 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 SYT17Q9BSW7 474 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 DCP1AQ9NPI6 582 aaPredicted RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 USP17L21D6R901 530 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 G3V3G9 751 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 LIFRP42702 1097 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 DIXDC1Q155Q3 683 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 GRIK5Q16478 980 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 SLF2Q8IX21 1173 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 MTA3Q9BTC8 594 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 ARPP21Q9UBL0 812 aaPredicted RBP16.76■□□□□ 0.27
CALD1-207ENST00000430085 MROH7-TTC4A0A0A0MT08 1334 aa16.76■□□□□ 0.27
CALD1-207ENST00000430085 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
CALD1-207ENST00000430085 CYP2D7A0A087X1C5 515 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 DPEP1P16444 411 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 USP5P45974 858 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
CALD1-207ENST00000430085 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 SGMS1Q86VZ5 419 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 RAB11FIP4Q86YS3 637 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 UBAC1Q9BSL1 405 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 CNPY2Q9Y2B0 182 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 FAM205AQ6ZU69 1335 aa16.75■□□□□ 0.27
CALD1-207ENST00000430085 ZBTB43O43298 467 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 TGFB2P61812 414 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 GTF2IP78347 998 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 WTAPQ15007 396 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 FBXW7Q969H0 707 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 GDPD2Q9HCC8 539 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 MBD3O95983 291 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 PPP4CP60510 307 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 CPLX2Q6PUV4 134 aaKnown RBP16.74■□□□□ 0.27
CALD1-207ENST00000430085 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 SH3RF3Q8TEJ3 882 aaPredicted RBP16.74■□□□□ 0.27
CALD1-207ENST00000430085 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 UTRNP46939 3433 aa16.74■□□□□ 0.27
CALD1-207ENST00000430085 LAMB1P07942 1786 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 MYH2Q9UKX2 1941 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 CDKL5O76039 1030 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 KCNA3P22001 575 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
CALD1-207ENST00000430085 SBK1Q52WX2 424 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 USP48Q86UV5 1035 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 AMOTL1Q8IY63 956 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 TMEM87AQ8NBN3 555 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
CALD1-207ENST00000430085 FIBPO43427 364 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
CALD1-207ENST00000430085 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
CALD1-207ENST00000430085 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 PLCG2P16885 1265 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 BTDP43251 543 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 FOSBP53539 338 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 KRT85P78386 507 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 PDE4BQ07343 736 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 DOK7Q18PE1 504 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
CALD1-207ENST00000430085 ZSCAN16Q9H4T2 348 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms