RNA–Protein interactions for RNA: ENST00000429236.5

SYNJ1-205, Transcript of synaptojanin 1, humanhuman

TSL 1 (best)

Gene SYNJ1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-205ENST00000429236 HMGB1P09429 215 aaKnown RBP23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 CYP2D6P10635 497 aa23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 PICALMQ13492 652 aa23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 CIAPIN1Q6FI81 312 aa23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 USP40Q9NVE5 1235 aa23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 SAP30BPQ9UHR5 308 aaKnown RBP23.36■■□□□ 1.33
SYNJ1-205ENST00000429236 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 ZDHHC15Q96MV8 337 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 TACC3Q9Y6A5 838 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 YBX3P16989 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 MCM2P49736 904 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 FGD1P98174 961 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 RRP12Q5JTH9 1297 aaKnown RBP23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 AKNAD1Q5T1N1 836 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 MFSD6Q6ZSS7 791 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 MKRN1Q9UHC7 482 aaKnown RBP23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 SERPINA10Q9UK55 444 aa23.35■■□□□ 1.33
SYNJ1-205ENST00000429236 FLT1P17948 1338 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 B4E1Z4 1266 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 CDC42EP5Q6NZY7 148 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 Q6ZUG5 572 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 NKX2-3Q8TAU0 364 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 SLKQ9H2G2 1235 aaPredicted RBP23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 ARPP21Q9UBL0 812 aaPredicted RBP23.34■■□□□ 1.33
SYNJ1-205ENST00000429236 CDK5RAP2Q96SN8 1893 aa23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 HDLBPQ00341 1268 aaKnown RBP23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 CFAP100Q494V2 611 aa23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 MB21D2Q8IYB1 491 aaPredicted RBP23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 GMLQ99445 158 aa23.33■■□□□ 1.33
SYNJ1-205ENST00000429236 CACNB3P54284 484 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 STAG1Q8WVM7 1258 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 MRIQ9BWK5 157 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 NAV1Q8NEY1 1877 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 TOB2Q14106 344 aaPredicted RBP23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 HDAC9Q9UKV0 1011 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
SYNJ1-205ENST00000429236 PRDM1O75626 825 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 POLR3DP05423 398 aaPredicted RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 MCM5P33992 734 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 EIF6P56537 245 aaKnown RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 EXOSC10Q01780 885 aaKnown RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 TNIP1Q15025 636 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 ANAPC4Q9UJX5 808 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 LIMCH1Q9UPQ0 1083 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 GJA3Q9Y6H8 435 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 PRC1O43663 620 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 WDHD1O75717 1129 aaPredicted RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 LMNB1P20700 586 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 AMOTL1Q8IY63 956 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 AGBL3Q8NEM8 1001 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 IL27Q8NEV9 243 aa23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 RNF41Q9H4P4 317 aaPredicted RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 DDX4Q9NQI0 724 aaKnown RBP23.31■■□□□ 1.32
SYNJ1-205ENST00000429236 KDM4AO75164 1064 aa23.3■■□□□ 1.32
SYNJ1-205ENST00000429236 SBK1Q52WX2 424 aa23.3■■□□□ 1.32
SYNJ1-205ENST00000429236 CYB5R4Q7L1T6 521 aa23.3■■□□□ 1.32
SYNJ1-205ENST00000429236 BRF1Q92994 677 aa23.3■■□□□ 1.32
SYNJ1-205ENST00000429236 FZD9O00144 591 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 LARGE1O95461 756 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 ANTXR2P58335 489 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 NFIAQ12857 509 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 PRMT6Q96LA8 375 aaPredicted RBP23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 CNNM2Q9H8M5 875 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 TPCN1Q9ULQ1 816 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 LAMB1P07942 1786 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 PLCD1P51178 756 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 ANKRD1Q15327 319 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 C12orf60Q5U649 245 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 KRT23Q9C075 422 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 TDRD3Q9H7E2 651 aaKnown RBP23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 GPHNQ9NQX3 736 aaPredicted RBP23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
SYNJ1-205ENST00000429236 SHTN1A0MZ66 631 aa23.28■■□□□ 1.32
SYNJ1-205ENST00000429236 DYNLL2Q96FJ2 89 aa23.28■■□□□ 1.32
SYNJ1-205ENST00000429236 SLC3A2P08195 630 aaKnown RBP23.28■■□□□ 1.32
SYNJ1-205ENST00000429236 TCP10Q12799 353 aa23.27■■□□□ 1.32
SYNJ1-205ENST00000429236 DLGAP5Q15398 846 aa23.27■■□□□ 1.32
SYNJ1-205ENST00000429236 ALDH8A1Q9H2A2 487 aaPredicted RBP23.27■■□□□ 1.32
SYNJ1-205ENST00000429236 ZSWIM5Q9P217 1185 aa23.27■■□□□ 1.32
SYNJ1-205ENST00000429236 SOCS7O14512 581 aa23.27■■□□□ 1.31
SYNJ1-205ENST00000429236 ME3Q16798 604 aa23.27■■□□□ 1.31
SYNJ1-205ENST00000429236 FOCADQ5VW36 1801 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 SPDYE2BA6NHP3 402 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 RANBP6O60518 1105 aaKnown RBP23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 SPDYE6P0CI01 402 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 STK3Q13188 491 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 ZKSCAN3Q9BRR0 538 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 NAP1L2Q9ULW6 460 aaPredicted RBP23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 ECM29Q5VYK3 1845 aa23.26■■□□□ 1.31
SYNJ1-205ENST00000429236 GMPSP49915 693 aaPredicted RBP23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 APOBRQ0VD83 1088 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 DDX60LQ5H9U9 1706 aaKnown RBP23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 MYH1P12882 1939 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 CLRN2A0PK11 232 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 PDE4BQ07343 736 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 GPR162Q16538 588 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 SLC44A5Q8NCS7 719 aa23.25■■□□□ 1.31
SYNJ1-205ENST00000429236 ESR2Q92731 530 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms