RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 RBM17Q96I25 401 aaKnown RBP23.08■■□□□ 1.29
CASC4-203ENST00000429162 STK36Q9NRP7 1315 aa23.08■■□□□ 1.28
CASC4-203ENST00000429162 RCAN1P53805 252 aa23.08■■□□□ 1.28
CASC4-203ENST00000429162 ZNF804AQ7Z570 1209 aa23.08■■□□□ 1.28
CASC4-203ENST00000429162 RNF214Q8ND24 703 aa23.08■■□□□ 1.28
CASC4-203ENST00000429162 PGBD1Q96JS3 809 aa23.08■■□□□ 1.28
CASC4-203ENST00000429162 CRNKL1Q9BZJ0 848 aaKnown RBP23.08■■□□□ 1.28
CASC4-203ENST00000429162 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
CASC4-203ENST00000429162 ILDR1Q86SU0 546 aaPredicted RBP23.07■■□□□ 1.28
CASC4-203ENST00000429162 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
CASC4-203ENST00000429162 RXRAP19793 462 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 PRDX5P30044 214 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 CDC27P30260 824 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 DZIP1Q86YF9 867 aaKnown RBP23.06■■□□□ 1.28
CASC4-203ENST00000429162 USP28Q96RU2 1077 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 IARSP41252 1262 aaKnown RBP23.06■■□□□ 1.28
CASC4-203ENST00000429162 ALG1Q9BT22 464 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 FUCA2Q9BTY2 467 aa23.06■■□□□ 1.28
CASC4-203ENST00000429162 CEBPZQ03701 1054 aaKnown RBP23.05■■□□□ 1.28
CASC4-203ENST00000429162 NTRK3Q16288 839 aa23.05■■□□□ 1.28
CASC4-203ENST00000429162 MAP3K11Q16584 847 aa23.05■■□□□ 1.28
CASC4-203ENST00000429162 DACT1Q9NYF0 836 aa23.05■■□□□ 1.28
CASC4-203ENST00000429162 BAZ2AQ9UIF9 1905 aaKnown RBP23.04■■□□□ 1.28
CASC4-203ENST00000429162 DDR1Q08345 913 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 UVSSAQ2YD98 709 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 OTUD7BQ6GQQ9 843 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 CCDC144CPQ8IYA2 1237 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 TDRD7Q8NHU6 1098 aaKnown RBP23.04■■□□□ 1.28
CASC4-203ENST00000429162 MYL10Q9BUA6 226 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 ATP8A2Q9NTI2 1148 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 AATFQ9NY61 560 aaKnown RBP eCLIP23.04■■□□□ 1.28
CASC4-203ENST00000429162 POLRMTO00411 1230 aaKnown RBP23.04■■□□□ 1.28
CASC4-203ENST00000429162 ATP2B4P23634 1241 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 RBM6P78332 1123 aaKnown RBP23.04■■□□□ 1.28
CASC4-203ENST00000429162 STK11IPQ8N1F8 1099 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 PDLIM2Q96JY6 352 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 ZKSCAN3Q9BRR0 538 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 CLSTN2Q9H4D0 955 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 FAM217BQ9NTX9 383 aaPredicted RBP23.04■■□□□ 1.28
CASC4-203ENST00000429162 RTEL1Q9NZ71 1219 aa23.04■■□□□ 1.28
CASC4-203ENST00000429162 LRRC37AA6NMS7 1700 aa23.03■■□□□ 1.28
CASC4-203ENST00000429162 HOXA10P31260 410 aaPredicted RBP23.03■■□□□ 1.28
CASC4-203ENST00000429162 GPSM2P81274 684 aa23.03■■□□□ 1.28
CASC4-203ENST00000429162 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
CASC4-203ENST00000429162 RTN1Q16799 776 aa23.03■■□□□ 1.28
CASC4-203ENST00000429162 WASF1Q92558 559 aa23.03■■□□□ 1.28
CASC4-203ENST00000429162 FTOQ9C0B1 505 aaKnown RBP eCLIP23.03■■□□□ 1.28
CASC4-203ENST00000429162 TNMDQ9H2S6 317 aa23.03■■□□□ 1.28
CASC4-203ENST00000429162 RTN4Q9NQC3 1192 aaKnown RBP23.03■■□□□ 1.28
CASC4-203ENST00000429162 CCDC196A0A1B0GTZ2 297 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 BBOX1O75936 387 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 LDHBP07195 334 aaKnown RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 CCDC192P0DO97 292 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 IFNAR1P17181 557 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 SSRP1Q08945 709 aaKnown RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 ZNF772Q68DY9 489 aaPredicted RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 PHKBQ93100 1093 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 DLEC1Q9Y238 1755 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 RANBP6O60518 1105 aaKnown RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 FMNL1O95466 1100 aaPredicted RBP23.02■■□□□ 1.28
CASC4-203ENST00000429162 FGRP09769 529 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 GSTO1P78417 241 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 TRIM29Q14134 588 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 GGA1Q9UJY5 639 aa23.02■■□□□ 1.28
CASC4-203ENST00000429162 TNKSO95271 1327 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 UFL1O94874 794 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 SLC3A2P08195 630 aaKnown RBP23.01■■□□□ 1.27
CASC4-203ENST00000429162 MYSM1Q5VVJ2 828 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 ZNF654Q8IZM8 581 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 PROM2Q8N271 834 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 CRAMP1Q96RY5 1269 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 DCP1AQ9NPI6 582 aaPredicted RBP23.01■■□□□ 1.27
CASC4-203ENST00000429162 JAG2Q9Y219 1238 aa23.01■■□□□ 1.27
CASC4-203ENST00000429162 USP17L12C9JPN9 530 aa23■■□□□ 1.27
CASC4-203ENST00000429162 USP17L21D6R901 530 aa23■■□□□ 1.27
CASC4-203ENST00000429162 YEATS4O95619 227 aa23■■□□□ 1.27
CASC4-203ENST00000429162 SEC23AQ15436 765 aa23■■□□□ 1.27
CASC4-203ENST00000429162 TMC4Q7Z404 712 aa23■■□□□ 1.27
CASC4-203ENST00000429162 SLC51AQ86UW1 340 aa23■■□□□ 1.27
CASC4-203ENST00000429162 SLC26A6Q9BXS9 759 aa23■■□□□ 1.27
CASC4-203ENST00000429162 POLR3EQ9NVU0 708 aa23■■□□□ 1.27
CASC4-203ENST00000429162 CYP2D7A0A087X1C5 515 aa23■■□□□ 1.27
CASC4-203ENST00000429162 KLRG2A4D1S0 409 aaPredicted RBP23■■□□□ 1.27
CASC4-203ENST00000429162 NR1I2O75469 434 aa23■■□□□ 1.27
CASC4-203ENST00000429162 PPP2R5BQ15173 497 aa23■■□□□ 1.27
CASC4-203ENST00000429162 SBK1Q52WX2 424 aa23■■□□□ 1.27
CASC4-203ENST00000429162 KRT40Q6A162 431 aa23■■□□□ 1.27
CASC4-203ENST00000429162 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
CASC4-203ENST00000429162 TRIM22Q8IYM9 498 aa23■■□□□ 1.27
CASC4-203ENST00000429162 KCNG4Q8TDN1 519 aa23■■□□□ 1.27
CASC4-203ENST00000429162 ZSCAN10Q96SZ4 725 aaPredicted RBP23■■□□□ 1.27
CASC4-203ENST00000429162 KIF28PB7ZC32 967 aa22.99■■□□□ 1.27
CASC4-203ENST00000429162 ORC4O43929 436 aa22.99■■□□□ 1.27
CASC4-203ENST00000429162 ME1P48163 572 aa22.99■■□□□ 1.27
CASC4-203ENST00000429162 CCDC73Q6ZRK6 1079 aa22.99■■□□□ 1.27
CASC4-203ENST00000429162 IQCA1Q86XH1 822 aa22.99■■□□□ 1.27
CASC4-203ENST00000429162 GJB4Q9NTQ9 266 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms