RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CLIC4Q9Y696 253 aa15.89■□□□□ 0.13
THBS3-202ENST00000428962 MAGEB6P1A0A0J9YX57 407 aa15.89■□□□□ 0.13
THBS3-202ENST00000428962 SSRP1Q08945 709 aaKnown RBP15.89■□□□□ 0.13
THBS3-202ENST00000428962 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
THBS3-202ENST00000428962 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
THBS3-202ENST00000428962 RAI14Q9P0K7 980 aa15.89■□□□□ 0.13
THBS3-202ENST00000428962 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 KIF28PB7ZC32 967 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 PRKAB2O43741 272 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 CDC27P30260 824 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 WTAPQ15007 396 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 KRT40Q6A162 431 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 NAT10Q9H0A0 1025 aaKnown RBP15.88■□□□□ 0.13
THBS3-202ENST00000428962 TOMM22Q9NS69 142 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 NARFQ9UHQ1 456 aa15.88■□□□□ 0.13
THBS3-202ENST00000428962 PDS5AQ29RF7 1337 aaKnown RBP15.88■□□□□ 0.13
THBS3-202ENST00000428962 COL4A1P02462 1669 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 EP400Q96L91 3159 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
THBS3-202ENST00000428962 IFNAR1P17181 557 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 RXRAP19793 462 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 PPARAQ07869 468 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 NTRK3Q16288 839 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 TRIM22Q8IYM9 498 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 ABCF2Q9UG63 623 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 ANAPC4Q9UJX5 808 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 MINPP1Q9UNW1 487 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 GYG1P46976 350 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 ZRSR1Q15695 479 aaKnown RBP15.87■□□□□ 0.13
THBS3-202ENST00000428962 RTN1Q16799 776 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
THBS3-202ENST00000428962 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 TMED8Q6PL24 325 aaPredicted RBP15.87■□□□□ 0.13
THBS3-202ENST00000428962 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 SDF4Q9BRK5 362 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 TRIM5Q9C035 493 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 TTC12Q9H892 705 aaPredicted RBP15.87■□□□□ 0.13
THBS3-202ENST00000428962 SENP2Q9HC62 589 aa15.87■□□□□ 0.13
THBS3-202ENST00000428962 PCP11498 1178 aaKnown RBP15.86■□□□□ 0.13
THBS3-202ENST00000428962 CDC25BP30305 580 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 ZNF75DP51815 510 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 SARM1Q6SZW1 724 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 ESR2Q92731 530 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 PHKBQ93100 1093 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
THBS3-202ENST00000428962 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 UBAC1Q9BSL1 405 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 FAM217BQ9NTX9 383 aaPredicted RBP15.86■□□□□ 0.13
THBS3-202ENST00000428962 COL1A1P02452 1464 aaPredicted RBP15.86■□□□□ 0.13
THBS3-202ENST00000428962 BTAF1O14981 1849 aa15.86■□□□□ 0.13
THBS3-202ENST00000428962 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 A0A1B0GVL5 298 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 BECN2A8MW95 431 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
THBS3-202ENST00000428962 PPP6R2O75170 966 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 ZPR1O75312 459 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 CMA1P23946 247 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
THBS3-202ENST00000428962 NDUFA8P51970 172 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 IQCB1Q15051 598 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 SAFBQ15424 915 aaKnown RBP eCLIP15.85■□□□□ 0.13
THBS3-202ENST00000428962 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
THBS3-202ENST00000428962 SPC24Q8NBT2 197 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
THBS3-202ENST00000428962 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
THBS3-202ENST00000428962 R3HCC1Q9Y3T6 440 aaKnown RBP15.85■□□□□ 0.13
THBS3-202ENST00000428962 BAG6P46379 1132 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 C11orf57Q6ZUT1 292 aaPredicted RBP15.84■□□□□ 0.13
THBS3-202ENST00000428962 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 DRC7Q8IY82 874 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 MPNDQ8N594 471 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 AIFM3Q96NN9 605 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 MAST2Q6P0Q8 1798 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 RPS8P62241 208 aaKnown RBP15.84■□□□□ 0.13
THBS3-202ENST00000428962 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.13
THBS3-202ENST00000428962 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
THBS3-202ENST00000428962 BCL2L12Q9HB09 334 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 SPTLC3Q9NUV7 552 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 TACC3Q9Y6A5 838 aa15.84■□□□□ 0.13
THBS3-202ENST00000428962 MYH13Q9UKX3 1938 aa15.83■□□□□ 0.13
THBS3-202ENST00000428962 GNPATO15228 680 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 DEXIO95424 95 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms