RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 CEP290O15078 2479 aa18.3■□□□□ 0.52
PDAP1-202ENST00000426447 STAP2Q9UGK3 403 aa18.3■□□□□ 0.52
PDAP1-202ENST00000426447 AFG3L2Q9Y4W6 797 aa18.3■□□□□ 0.52
PDAP1-202ENST00000426447 PHF20L1A8MW92 1017 aa18.29■□□□□ 0.52
PDAP1-202ENST00000426447 RGS3P49796 1198 aa18.29■□□□□ 0.52
PDAP1-202ENST00000426447 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
PDAP1-202ENST00000426447 COA7Q96BR5 231 aa18.29■□□□□ 0.52
PDAP1-202ENST00000426447 USP44Q9H0E7 712 aa18.29■□□□□ 0.52
PDAP1-202ENST00000426447 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
PDAP1-202ENST00000426447 ENTPD3O75355 529 aa18.28■□□□□ 0.52
PDAP1-202ENST00000426447 IRF5Q13568 498 aa18.28■□□□□ 0.52
PDAP1-202ENST00000426447 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
PDAP1-202ENST00000426447 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
PDAP1-202ENST00000426447 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
PDAP1-202ENST00000426447 PTPRCP08575 1304 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 SZT2Q5T011 3432 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 TRIM75PA6NK02 468 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 LRCH3Q96II8 777 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 PAWRQ96IZ0 340 aaKnown RBP18.27■□□□□ 0.52
PDAP1-202ENST00000426447 SIL1Q9H173 461 aa18.27■□□□□ 0.52
PDAP1-202ENST00000426447 AK9Q5TCS8 1911 aa18.27■□□□□ 0.51
PDAP1-202ENST00000426447 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
PDAP1-202ENST00000426447 ANP32CO43423 234 aa18.26■□□□□ 0.51
PDAP1-202ENST00000426447 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
PDAP1-202ENST00000426447 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
PDAP1-202ENST00000426447 ATG9AQ7Z3C6 839 aa18.26■□□□□ 0.51
PDAP1-202ENST00000426447 NECAB2Q7Z6G3 386 aa18.26■□□□□ 0.51
PDAP1-202ENST00000426447 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
PDAP1-202ENST00000426447 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
PDAP1-202ENST00000426447 SALL1Q9NSC2 1324 aa18.25■□□□□ 0.51
PDAP1-202ENST00000426447 SEMA3EO15041 775 aa18.25■□□□□ 0.51
PDAP1-202ENST00000426447 PICALMQ13492 652 aa18.25■□□□□ 0.51
PDAP1-202ENST00000426447 DZIP1Q86YF9 867 aaKnown RBP18.25■□□□□ 0.51
PDAP1-202ENST00000426447 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
PDAP1-202ENST00000426447 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
PDAP1-202ENST00000426447 PAK6Q9NQU5 681 aaPredicted RBP18.25■□□□□ 0.51
PDAP1-202ENST00000426447 DDTLA6NHG4 134 aaPredicted RBP18.24■□□□□ 0.51
PDAP1-202ENST00000426447 SH3BP5LQ7L8J4 393 aa18.24■□□□□ 0.51
PDAP1-202ENST00000426447 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
PDAP1-202ENST00000426447 PNMA3Q9UL41 463 aa18.24■□□□□ 0.51
PDAP1-202ENST00000426447 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
PDAP1-202ENST00000426447 PHKA1P46020 1223 aa18.23■□□□□ 0.51
PDAP1-202ENST00000426447 MAP3K10Q02779 954 aa18.23■□□□□ 0.51
PDAP1-202ENST00000426447 CRISPLD2Q9H0B8 497 aa18.23■□□□□ 0.51
PDAP1-202ENST00000426447 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.23■□□□□ 0.511e-8■■■■□ 22.3
PDAP1-202ENST00000426447 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
PDAP1-202ENST00000426447 ATRNL1Q5VV63 1379 aa18.22■□□□□ 0.51
PDAP1-202ENST00000426447 CIAO1O76071 339 aa18.22■□□□□ 0.51
PDAP1-202ENST00000426447 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
PDAP1-202ENST00000426447 CCDC84Q86UT8 332 aaPredicted RBP18.22■□□□□ 0.51
PDAP1-202ENST00000426447 C7orf61Q8IZ16 206 aa18.22■□□□□ 0.51
PDAP1-202ENST00000426447 DIS3LQ8TF46 1054 aaKnown RBP18.22■□□□□ 0.51
PDAP1-202ENST00000426447 UBTFL1P0CB47 393 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 BTDP43251 543 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 CCDC102BQ68D86 513 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 ANKLE1Q8NAG6 615 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 HMX1Q9NP08 348 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-202ENST00000426447 GAKO14976 1311 aa18.21■□□□□ 0.51
PDAP1-202ENST00000426447 HMGCRP04035 888 aa18.2■□□□□ 0.5
PDAP1-202ENST00000426447 BMP8BP34820 402 aa18.2■□□□□ 0.5
PDAP1-202ENST00000426447 IL15P40933 162 aaPredicted RBP18.2■□□□□ 0.5
PDAP1-202ENST00000426447 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
PDAP1-202ENST00000426447 SPP2Q13103 211 aa18.2■□□□□ 0.5
PDAP1-202ENST00000426447 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDAP1-202ENST00000426447 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
PDAP1-202ENST00000426447 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
PDAP1-202ENST00000426447 MGAMO43451 1857 aa18.2■□□□□ 0.5
PDAP1-202ENST00000426447 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
PDAP1-202ENST00000426447 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
PDAP1-202ENST00000426447 GDF15Q99988 308 aa18.19■□□□□ 0.5
PDAP1-202ENST00000426447 RPTORQ8N122 1335 aa18.19■□□□□ 0.5
PDAP1-202ENST00000426447 RANBP2P49792 3224 aaKnown RBP18.19■□□□□ 0.5
PDAP1-202ENST00000426447 TBC1D12O60347 775 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 SYN1P17600 705 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 ADORA1P30542 326 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 TIMM10P62072 90 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 DEFB123Q8N688 67 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
PDAP1-202ENST00000426447 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 HMGCS2P54868 508 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 RASGRF1Q13972 1273 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 GPR153Q6NV75 609 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
PDAP1-202ENST00000426447 PA2G4Q9UQ80 394 aaKnown RBP18.17■□□□□ 0.5
PDAP1-202ENST00000426447 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 MROH7-TTC4A0A0A0MT08 1334 aa18.17■□□□□ 0.5
PDAP1-202ENST00000426447 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
PDAP1-202ENST00000426447 MECOMQ03112 1051 aa18.16■□□□□ 0.5
PDAP1-202ENST00000426447 TRIM32Q13049 653 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms