RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 PRPF40BQ6NWY9 871 aaKnown RBP6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 ARHGAP27Q6ZUM4 889 aa6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 DUSP23Q9BVJ7 150 aa6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 SNX11Q9Y5W9 270 aa6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
SEMA3A-202ENST00000420047 ZNF862O60290 1169 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 CPNE3O75131 537 aaKnown RBP6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 PPP1R15AO75807 674 aaPredicted RBP6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 ABL1P00519 1130 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 USPL1Q5W0Q7 1092 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 EGFL7Q9UHF1 273 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 BRPF3Q9ULD4 1205 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 PCDHGC5Q9Y5F6 944 aa6.38□□□□□ -1.39
SEMA3A-202ENST00000420047 LRRC10BA6NIK2 292 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 CD96P40200 585 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 PDE3BQ13370 1112 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 TNKS2Q9H2K2 1166 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 PLAGL2Q9UPG8 496 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 U3KQE9 123 aa6.37□□□□□ -1.39
SEMA3A-202ENST00000420047 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 TMEM238LA0A1B0GVL6 79 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 RNGTTO60942 597 aaKnown RBP6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 LEFTY1O75610 366 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 GSTP1P09211 210 aaKnown RBP6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 TTLL4Q14679 1199 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 ZSWIM9Q86XI8 627 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 ASB11Q8WXH4 323 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 TRAK1Q9UPV9 953 aa6.36□□□□□ -1.39
SEMA3A-202ENST00000420047 PDS5BQ9NTI5 1447 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 ICMTO60725 284 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 CITED4Q96RK1 184 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 ZC3H12CQ9C0D7 883 aaKnown RBP6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 DNAJC25Q9H1X3 360 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 LAMC3Q9Y6N6 1575 aa6.35□□□□□ -1.39
SEMA3A-202ENST00000420047 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 FAAP100Q0VG06 881 aa6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 KCNMB1Q16558 191 aa6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 CILP2Q8IUL8 1156 aa6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 CCDC74AQ96AQ1 378 aa6.34□□□□□ -1.39
SEMA3A-202ENST00000420047 ZNF503-AS2A6NEH8 195 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 NDUFB5O43674 189 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 RAP1GAPP47736 663 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 FAM129BQ96TA1 746 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 SSU72Q9NP77 194 aaKnown RBP6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
SEMA3A-202ENST00000420047 GADD45BO75293 160 aaPredicted RBP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 TSPAN15O95858 294 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 NEFMP07197 916 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ZNF157P51786 506 aaPredicted RBP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ERVK-24P63145 666 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ORC1Q13415 861 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ECM1Q16610 540 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ZC3H12AQ5D1E8 599 aaKnown RBP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 FAM214BQ7L5A3 538 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 TOP6BLQ8N6T0 577 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 RNF214Q8ND24 703 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ISL2Q96A47 359 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 HEXIM2Q96MH2 286 aaKnown RBP6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 CCDC88BA6NC98 1476 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 FANCD2Q9BXW9 1451 aa6.32□□□□□ -1.4
SEMA3A-202ENST00000420047 ITIH2P19823 946 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 AFMP43652 599 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 ZP2Q05996 745 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 IKZF1Q13422 519 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 MLANAQ16655 118 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 SIAH1Q8IUQ4 282 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 PPP4R2Q9NY27 417 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 CTNND2Q9UQB3 1225 aa6.31□□□□□ -1.4
SEMA3A-202ENST00000420047 MRC2Q9UBG0 1479 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 SUPT5HO00267 1087 aaKnown RBP6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 EIF1AYO14602 144 aaKnown RBP6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 CFPP27918 469 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 GRM2Q14416 872 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 DTHD1Q6ZMT9 781 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 GLYCTKQ8IVS8 523 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 KCNB2Q92953 911 aa6.3□□□□□ -1.4
SEMA3A-202ENST00000420047 CFTRP13569 1480 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 H3BRB1 525 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 ARNTP27540 789 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 ARHGAP4P98171 946 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 B4GALNT3Q6L9W6 998 aa6.29□□□□□ -1.4
SEMA3A-202ENST00000420047 ANKLE2Q86XL3 938 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms