RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 METTL22Q9BUU2 404 aaPredicted RBP8.69□□□□□ -1.02
LINC00343-201ENST00000414368 FHDC1Q9C0D6 1143 aaPredicted RBP8.69□□□□□ -1.02
LINC00343-201ENST00000414368 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
LINC00343-201ENST00000414368 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
LINC00343-201ENST00000414368 ITGB2P05107 769 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 CWF19L2Q2TBE0 894 aaKnown RBP8.68□□□□□ -1.02
LINC00343-201ENST00000414368 PRR5LQ6MZQ0 368 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 NLRP10Q86W26 655 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 NBPF5PQ86XG9 351 aaPredicted RBP8.68□□□□□ -1.02
LINC00343-201ENST00000414368 OGFOD1Q8N543 542 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 DNAAF4Q8WXU2 420 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 JARID2Q92833 1246 aaPredicted RBP8.68□□□□□ -1.02
LINC00343-201ENST00000414368 ISCA1Q9BUE6 129 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 KRTAP9-9Q9BYP9 154 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 KRTAP9-4Q9BYQ2 154 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
LINC00343-201ENST00000414368 PGPEP1Q9NXJ5 209 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 CARMIL3Q8ND23 1372 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 ATP10DQ9P241 1426 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 NRXN2Q9P2S2 1712 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 ANKRD31Q8N7Z5 1873 aa8.68□□□□□ -1.02
LINC00343-201ENST00000414368 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L15C9J2P7 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L13C9JLJ4 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L11C9JVI0 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L21D6R901 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L18D6R9N7 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L22D6RA61 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L17D6RBQ6 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L19D6RCP7 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L20D6RJB6 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 NPHP1O15259 732 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 IGKV5-2P06315 115 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 GTF2IP78347 998 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 USP17L24Q0WX57 530 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 SLC4A10Q6U841 1118 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 N4BP2Q86UW6 1770 aaPredicted RBP8.67□□□□□ -1.02
LINC00343-201ENST00000414368 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 NLGN2Q8NFZ4 835 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
LINC00343-201ENST00000414368 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
LINC00343-201ENST00000414368 SYT17Q9BSW7 474 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 CYLDQ9NQC7 956 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
LINC00343-201ENST00000414368 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
LINC00343-201ENST00000414368 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 NTSR2O95665 410 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 GTF2E1P29083 439 aaPredicted RBP8.66□□□□□ -1.02
LINC00343-201ENST00000414368 PARP10Q53GL7 1025 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 PPP1R26Q5T8A7 1209 aaPredicted RBP8.66□□□□□ -1.02
LINC00343-201ENST00000414368 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 FAM89AQ96GI7 184 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 UTP14AQ9BVJ6 771 aaKnown RBP8.66□□□□□ -1.02
LINC00343-201ENST00000414368 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 TRMT112Q9UI30 125 aaKnown RBP8.66□□□□□ -1.02
LINC00343-201ENST00000414368 RCAN3Q9UKA8 241 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
LINC00343-201ENST00000414368 C10orf71Q711Q0 1435 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 ABCC12Q96J65 1359 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 UTRNP46939 3433 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 PTPRCP08575 1304 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 A0A0G2JLW4 131 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 HCLS1P14317 486 aaPredicted RBP8.65□□□□□ -1.02
LINC00343-201ENST00000414368 CHRNA5P30532 468 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 NEXNQ0ZGT2 675 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
LINC00343-201ENST00000414368 CRTC2Q53ET0 693 aaPredicted RBP8.65□□□□□ -1.02
LINC00343-201ENST00000414368 BEND3Q5T5X7 828 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 PPP1R42Q7Z4L9 355 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 NYXQ9GZU5 481 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 CWC25Q9NXE8 425 aaPredicted RBP8.65□□□□□ -1.02
LINC00343-201ENST00000414368 USTQ9Y2C2 406 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.02
LINC00343-201ENST00000414368 KIAA1551Q9HCM1 1747 aa8.65□□□□□ -1.03
LINC00343-201ENST00000414368 TAF1P21675 1872 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 PLIN1O60240 522 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 NR3C2P08235 984 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 DPEP1P16444 411 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 ST5P78524 1137 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 ELOAQ14241 798 aaKnown RBP8.64□□□□□ -1.03
LINC00343-201ENST00000414368 GCKRQ14397 625 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 LARGE2Q8N3Y3 721 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
LINC00343-201ENST00000414368 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 FAM200AQ8TCP9 573 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 NANOS1Q8WY41 292 aaKnown RBP8.64□□□□□ -1.03
LINC00343-201ENST00000414368 BRIP1Q9BX63 1249 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
LINC00343-201ENST00000414368 CACNA1SQ13698 1873 aa8.64□□□□□ -1.03
LINC00343-201ENST00000414368 LAMB2P55268 1798 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 COL11A2P13942 1736 aaPredicted RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms