RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 ATXN2Q99700 1313 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 DLEC1Q9Y238 1755 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 ADCY9O60503 1353 aa12.23□□□□□ -0.45
NIF3L1-204ENST00000409357 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 GOLGA1Q92805 767 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 CARD6Q9BX69 1037 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 PARD6BQ9BYG5 372 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 GBP3Q9H0R5 595 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 SUFUQ9UMX1 484 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 MRFAP1Q9Y605 127 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 CEP350Q5VT06 3117 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 H3BQF6 201 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 PPP1R12AO14974 1030 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 NPHP1O15259 732 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 ERLIN1O75477 346 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 TGFB2P61812 414 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 DZIP3Q86Y13 1208 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 EGFL6Q8IUX8 553 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 TSPYL4Q9UJ04 414 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 RCOR1Q9UKL0 485 aa12.22□□□□□ -0.45
NIF3L1-204ENST00000409357 NUP98P52948 1817 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 A0A087WZG4 1122 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 CHL1O00533 1208 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 SERPINB2P05120 415 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 KRT24Q2M2I5 525 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 LRRC31Q6UY01 552 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 HOMER1Q86YM7 354 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 RILPL2Q969X0 211 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 SNRKQ9NRH2 765 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
NIF3L1-204ENST00000409357 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 LARGE1O95461 756 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 PSMA5P28066 241 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 TDO2P48775 406 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 ME3Q16798 604 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 DNAAF4Q8WXU2 420 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
NIF3L1-204ENST00000409357 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 IKBKBO14920 756 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 ERCC3P19447 782 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 PPP2R3AQ06190 1150 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 CDC37L1Q7L3B6 337 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 ENGASEQ8NFI3 743 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 BICD2Q8TD16 824 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 ARHGAP6O43182 974 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 AARSP49588 968 aaKnown RBP eCLIP12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 RESTQ13127 1097 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 HLFQ16534 295 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 CTCFLQ8NI51 663 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 KCNG1Q9UIX4 513 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
NIF3L1-204ENST00000409357 A6NNZ2 444 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 CBFA2T2O43439 604 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 ANXA1P04083 346 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 MYL6BP14649 208 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 TUBB8Q3ZCM7 444 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 PRR5LQ6MZQ0 368 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 CEP112Q8N8E3 955 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 ERCC4Q92889 916 aaPredicted RBP12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 VPS18Q9P253 973 aa12.18□□□□□ -0.46
NIF3L1-204ENST00000409357 TNRC6CQ9HCJ0 1690 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 SART3Q15020 963 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 TTLL5Q6EMB2 1281 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 TTLL7Q6ZT98 887 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 CCAR1Q8IX12 1150 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-204ENST00000409357 MICALL1Q8N3F8 863 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms