RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 AATFQ9NY61 560 aaKnown RBP eCLIP28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 UFL1O94874 794 aa28.79■■■□□ 2.2
DNMT3A-206ENST00000406659 CRAMP1Q96RY5 1269 aa28.79■■■□□ 2.2
DNMT3A-206ENST00000406659 ZKSCAN3Q9BRR0 538 aa28.79■■■□□ 2.2
DNMT3A-206ENST00000406659 GGA1Q9UJY5 639 aa28.79■■■□□ 2.2
DNMT3A-206ENST00000406659 CCDC88AQ3V6T2 1871 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 LDHBP07195 334 aaKnown RBP28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 CDC27P30260 824 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 CCDC144CPQ8IYA2 1237 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 FBXO18Q8NFZ0 1043 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 UBAC1Q9BSL1 405 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 MAST2Q6P0Q8 1798 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 ZNF827Q17R98 1081 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 OTUD7BQ6GQQ9 843 aa28.78■■■□□ 2.2
DNMT3A-206ENST00000406659 CTR9Q6PD62 1173 aa28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 KLHL34Q8N239 644 aa28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 RGS22Q8NE09 1264 aa28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 GPR101Q96P66 508 aaPredicted RBP28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 MYL10Q9BUA6 226 aa28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 ATP8A2Q9NTI2 1148 aa28.77■■■□□ 2.2
DNMT3A-206ENST00000406659 MYH15Q9Y2K3 1946 aa28.76■■■□□ 2.2
DNMT3A-206ENST00000406659 KLRG2A4D1S0 409 aaPredicted RBP28.76■■■□□ 2.19
DNMT3A-206ENST00000406659 PCP11498 1178 aaKnown RBP28.76■■■□□ 2.19
DNMT3A-206ENST00000406659 CEBPZQ03701 1054 aaKnown RBP28.76■■■□□ 2.19
DNMT3A-206ENST00000406659 NLGN1Q8N2Q7 840 aa28.76■■■□□ 2.19
DNMT3A-206ENST00000406659 CYP2D7A0A087X1C5 515 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 USP17L12C9JPN9 530 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 USP17L21D6R901 530 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 AKT1S1Q96B36 256 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 ALG1Q9BT22 464 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 RCOR1Q9UKL0 485 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 LIG1P18858 919 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 IARSP41252 1262 aaKnown RBP28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 GSTO1P78417 241 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 CCDC173Q0VFZ6 552 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 PGBD1Q96JS3 809 aa28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 FAM217BQ9NTX9 383 aaPredicted RBP28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 BAZ2AQ9UIF9 1905 aaKnown RBP28.75■■■□□ 2.19
DNMT3A-206ENST00000406659 EP400Q96L91 3159 aa28.74■■■□□ 2.19
DNMT3A-206ENST00000406659 ILDR1Q86SU0 546 aaPredicted RBP28.74■■■□□ 2.19
DNMT3A-206ENST00000406659 COL23A1Q86Y22 540 aaPredicted RBP28.74■■■□□ 2.19
DNMT3A-206ENST00000406659 BICD2Q8TD16 824 aa28.74■■■□□ 2.19
DNMT3A-206ENST00000406659 DCP1AQ9NPI6 582 aaPredicted RBP28.74■■■□□ 2.19
DNMT3A-206ENST00000406659 NTRK3Q16288 839 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 TMC4Q7Z404 712 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 PHKBQ93100 1093 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 USP28Q96RU2 1077 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 PODXL2Q9NZ53 605 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 NID2Q14112 1375 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 SSRP1Q08945 709 aaKnown RBP28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 BRAPQ7Z569 592 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 FLAD1Q8NFF5 587 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 CD209Q9NNX6 404 aa28.73■■■□□ 2.19
DNMT3A-206ENST00000406659 SMIM22K7EJ46 135 aa28.72■■■□□ 2.19
DNMT3A-206ENST00000406659 SLC3A2P08195 630 aaKnown RBP28.72■■■□□ 2.19
DNMT3A-206ENST00000406659 RTN1Q16799 776 aa28.72■■■□□ 2.19
DNMT3A-206ENST00000406659 RANBP6O60518 1105 aaKnown RBP28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 FGRP09769 529 aa28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 RXRBP28702 533 aa28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 RCAN1P53805 252 aa28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 RNF214Q8ND24 703 aa28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 NUP62CLQ9H1M0 184 aa28.71■■■□□ 2.19
DNMT3A-206ENST00000406659 LDHCP07864 332 aa28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 PPP1R9BQ96SB3 815 aa28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 NOL10Q9BSC4 688 aaKnown RBP28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 GJB4Q9NTQ9 266 aa28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 DDX19AQ9NUU7 478 aaKnown RBP28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 ARPP21Q9UBL0 812 aaPredicted RBP28.7■■■□□ 2.19
DNMT3A-206ENST00000406659 TNKSO95271 1327 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 STK36Q9NRP7 1315 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 CCDC196A0A1B0GTZ2 297 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 IFNAR1P17181 557 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 SEC23AQ15436 765 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 SBK1Q52WX2 424 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 ZNF654Q8IZM8 581 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 TBC1D16Q8TBP0 767 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 ZSCAN10Q96SZ4 725 aaPredicted RBP28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 SLC26A6Q9BXS9 759 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 FTOQ9C0B1 505 aaKnown RBP eCLIP28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 DUOX1Q9NRD9 1551 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 DACT1Q9NYF0 836 aa28.7■■■□□ 2.18
DNMT3A-206ENST00000406659 PPEF1O14829 653 aaPredicted RBP28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 FMNL1O95466 1100 aaPredicted RBP28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 POLR3DP05423 398 aaPredicted RBP28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 IL1R1P14778 569 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 TRIM29Q14134 588 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 IQCA1Q86XH1 822 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 SP8Q8IXZ3 490 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 WASF1Q92558 559 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 AIFM3Q96NN9 605 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 POLLQ9UGP5 575 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 KIAA1551Q9HCM1 1747 aa28.69■■■□□ 2.18
DNMT3A-206ENST00000406659 C6orf229H3BNL8 230 aa28.68■■■□□ 2.18
DNMT3A-206ENST00000406659 BAG3O95817 575 aa28.68■■■□□ 2.18
DNMT3A-206ENST00000406659 KIF23Q02241 960 aaPredicted RBP28.68■■■□□ 2.18
DNMT3A-206ENST00000406659 RTEL1Q9NZ71 1219 aa28.68■■■□□ 2.18
DNMT3A-206ENST00000406659 ORC4O43929 436 aa28.67■■■□□ 2.18
DNMT3A-206ENST00000406659 PRDM1O75626 825 aa28.67■■■□□ 2.18
DNMT3A-206ENST00000406659 KRT40Q6A162 431 aa28.67■■■□□ 2.18
DNMT3A-206ENST00000406659 NUP133Q8WUM0 1156 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms