RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RREB1Q92766 1687 aa18.71■□□□□ 0.59
LSP1-204ENST00000406638 GOLGA8FQ08AF8 430 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 GOLGA8DPQ0D2H9 430 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 CCDC158Q5M9N0 1113 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 FAM196AQ6ZSG2 479 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
LSP1-204ENST00000406638 PARP3Q9Y6F1 533 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 PHLPP2Q6ZVD8 1323 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 CNTNAP4Q9C0A0 1308 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 A0A1B0GVL5 298 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 ZRSR1Q15695 479 aaKnown RBP18.7■□□□□ 0.58
LSP1-204ENST00000406638 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
LSP1-204ENST00000406638 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 HAUS7Q99871 368 aa18.7■□□□□ 0.58
LSP1-204ENST00000406638 CWC15Q9P013 229 aaKnown RBP18.7■□□□□ 0.58
LSP1-204ENST00000406638 RRP15Q9Y3B9 282 aaKnown RBP18.7■□□□□ 0.58
LSP1-204ENST00000406638 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
LSP1-204ENST00000406638 SRLQ86TD4 932 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 ATP8B1O43520 1251 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
LSP1-204ENST00000406638 ISM2Q6H9L7 571 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 Q6ZUG5 572 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 AK7Q96M32 723 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 ARFGAP3Q9NP61 516 aa18.69■□□□□ 0.58
LSP1-204ENST00000406638 TUBB4AP04350 444 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 GOLGA5Q8TBA6 731 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 SCRN1Q12765 414 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 VGLL2Q8N8G2 317 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 SRRTQ9BXP5 876 aaKnown RBP18.68■□□□□ 0.58
LSP1-204ENST00000406638 FUT8Q9BYC5 575 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 PARD6BQ9BYG5 372 aa18.68■□□□□ 0.58
LSP1-204ENST00000406638 H3BQF6 201 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 TPM1P09493 284 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 IFIT1P09914 478 aaKnown RBP18.67■□□□□ 0.58
LSP1-204ENST00000406638 ATP1A3P13637 1013 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 KCNJ6P48051 423 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 RGS22Q8NE09 1264 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
LSP1-204ENST00000406638 GTF2A1P52655 376 aaPredicted RBP18.67■□□□□ 0.58
LSP1-204ENST00000406638 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
LSP1-204ENST00000406638 RTCBQ9Y3I0 505 aaKnown RBP18.67■□□□□ 0.58
LSP1-204ENST00000406638 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
LSP1-204ENST00000406638 FMR1NBQ8N0W7 255 aaPredicted RBP18.66■□□□□ 0.58
LSP1-204ENST00000406638 GPR108Q9NPR9 543 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 KIAA1468Q9P260 1216 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 NDUFA8P51970 172 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 NEK1Q96PY6 1258 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
LSP1-204ENST00000406638 GPR161Q8N6U8 529 aaKnown RBP18.65■□□□□ 0.58
LSP1-204ENST00000406638 WDR24Q96S15 920 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 HIP1O00291 1037 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 ZAP70P43403 619 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 FANCCQ00597 558 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 EXOC4Q96A65 974 aa18.65■□□□□ 0.58
LSP1-204ENST00000406638 TAF1P21675 1872 aa18.64■□□□□ 0.58
LSP1-204ENST00000406638 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.58
LSP1-204ENST00000406638 BRWD3Q6RI45 1802 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 A0A0G2JLW4 131 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 ZPR1O75312 459 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 ACTN2P35609 894 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 TTC39AQ5SRH9 613 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 PROM2Q8N271 834 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 MRPS27Q92552 414 aaKnown RBP18.64■□□□□ 0.57
LSP1-204ENST00000406638 ZSWIM4Q9H7M6 989 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 CCP110O43303 1012 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 PHKA1P46020 1223 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 CCT2P78371 535 aaKnown RBP18.64■□□□□ 0.57
LSP1-204ENST00000406638 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
LSP1-204ENST00000406638 FOXR1Q6PIV2 292 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 DPF2Q92785 391 aa18.64■□□□□ 0.57
LSP1-204ENST00000406638 PDE8BO95263 885 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 GNG11P61952 73 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 PPP2R3AQ06190 1150 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 NCAPHQ15003 741 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 CLEC4GQ6UXB4 293 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 ZNF396Q96N95 335 aaPredicted RBP18.63■□□□□ 0.57
LSP1-204ENST00000406638 MYH3P11055 1940 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 VWA3AA6NCI4 1184 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 MCAMP43121 646 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 LONRF2Q1L5Z9 754 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 KBTBD3Q8NAB2 608 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 VPS18Q9P253 973 aa18.63■□□□□ 0.57
LSP1-204ENST00000406638 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
LSP1-204ENST00000406638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
LSP1-204ENST00000406638 MCM6Q14566 821 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 ICE2Q659A1 982 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
LSP1-204ENST00000406638 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 TOMM22Q9NS69 142 aa18.62■□□□□ 0.57
LSP1-204ENST00000406638 HMG20BQ9P0W2 317 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms