RNA–Protein interactions for RNA: ENST00000401530.5

VIT-204, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-204ENST00000401530 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
VIT-204ENST00000401530 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
VIT-204ENST00000401530 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
VIT-204ENST00000401530 ZNF213O14771 459 aa13.08□□□□□ -0.31
VIT-204ENST00000401530 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.31
VIT-204ENST00000401530 USP5P45974 858 aa13.08□□□□□ -0.31
VIT-204ENST00000401530 NUCB2P80303 420 aa13.08□□□□□ -0.31
VIT-204ENST00000401530 TEX11Q8IYF3 940 aa13.08□□□□□ -0.31
VIT-204ENST00000401530 OGFOD1Q8N543 542 aa13.08□□□□□ -0.31
VIT-204ENST00000401530 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.31
VIT-204ENST00000401530 ADAMTSL1Q8N6G6 1762 aa13.08□□□□□ -0.32
VIT-204ENST00000401530 DICER1Q9UPY3 1922 aaKnown RBP13.08□□□□□ -0.32
VIT-204ENST00000401530 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
VIT-204ENST00000401530 RHBDL3P58872 404 aa13.08□□□□□ -0.32
VIT-204ENST00000401530 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 GRIN3BO60391 1043 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 OFD1O75665 1012 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 PSMA5P28066 241 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
VIT-204ENST00000401530 MMP14P50281 582 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 ZNF445P59923 1031 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 APOBEC3HQ6NTF7 200 aaKnown RBP13.07□□□□□ -0.32
VIT-204ENST00000401530 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
VIT-204ENST00000401530 TM6SF1Q9BZW5 370 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
VIT-204ENST00000401530 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 SBF1O95248 1867 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
VIT-204ENST00000401530 HAND2P61296 217 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 USP40Q9NVE5 1235 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 GJA3Q9Y6H8 435 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
VIT-204ENST00000401530 MCM5P33992 734 aa13.06□□□□□ -0.32
VIT-204ENST00000401530 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
VIT-204ENST00000401530 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
VIT-204ENST00000401530 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
VIT-204ENST00000401530 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
VIT-204ENST00000401530 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
VIT-204ENST00000401530 CASTP20810 708 aaKnown RBP13.05□□□□□ -0.32
VIT-204ENST00000401530 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 CWC22Q9HCG8 908 aaKnown RBP13.05□□□□□ -0.32
VIT-204ENST00000401530 NAV1Q8NEY1 1877 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 E7EWF7 191 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 ST18O60284 1047 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
VIT-204ENST00000401530 PPARAQ07869 468 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 DLGAP5Q15398 846 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 SBK1Q52WX2 424 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 GAS2L3Q86XJ1 694 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 DPF2Q92785 391 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
VIT-204ENST00000401530 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 FLT1P17948 1338 aa13.05□□□□□ -0.32
VIT-204ENST00000401530 MINDY4BA8MYZ0 360 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 USP17L21D6R901 530 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
VIT-204ENST00000401530 NEK4P51957 841 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 STOX1Q6ZVD7 989 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
VIT-204ENST00000401530 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 PCDHAC2Q9Y5I4 1007 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 WDHD1O75717 1129 aaPredicted RBP13.04□□□□□ -0.32
VIT-204ENST00000401530 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 ZNF280AP59817 542 aaPredicted RBP13.04□□□□□ -0.32
VIT-204ENST00000401530 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 GPC2Q8N158 579 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 LAMB1P07942 1786 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
VIT-204ENST00000401530 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 DDX60LQ5H9U9 1706 aaKnown RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 TRDNQ13061 729 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 TMOD2Q9NZR1 351 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 ECM29Q5VYK3 1845 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 PICALMQ13492 652 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 AKNAD1Q5T1N1 836 aa13.03□□□□□ -0.32
VIT-204ENST00000401530 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
VIT-204ENST00000401530 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms