RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 RANBP17Q9H2T7 1088 aaKnown RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 NGRNQ9NPE2 291 aaKnown RBP4.67□□□□□ -1.66
CLHC1-201ENST00000401408 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 BTG4Q9NY30 223 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 CNTN3Q9P232 1028 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 ATP8A1Q9Y2Q0 1164 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 EMILIN1Q9Y6C2 1016 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 KIF1BO60333 1816 aa4.67□□□□□ -1.66
CLHC1-201ENST00000401408 ESYT3A0FGR9 886 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 LILRB3O75022 631 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 VAMP4O75379 141 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 ATF4P18848 351 aaPredicted RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TSPAN7P41732 249 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 DAB2P98082 770 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 KIAA2012Q0VF49 1180 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 PTK7Q13308 1070 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TUSC1Q2TAM9 212 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 FAM133BQ5BKY9 247 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 HYIQ5T013 277 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 FAM83BQ5T0W9 1011 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 CCDC73Q6ZRK6 1079 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 CATIPQ7Z7H3 387 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TMEM87BQ96K49 555 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 CABP2Q9NPB3 220 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 RIC8AQ9NPQ8 531 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 SNTG2Q9NY99 539 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 SPG7Q9UQ90 795 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 BCL9O00512 1426 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 AATKQ6ZMQ8 1374 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 hCG_1984214I3L0E3 225 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 SPTLC1O15269 473 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 PRPF40AO75400 957 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TCEA3O75764 348 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 IFIT2P09913 472 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 CNGA1P29973 690 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 PRIM1P49642 420 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 EIF5P55010 431 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 DNAJC21Q5F1R6 531 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 ALKBH2Q6NS38 261 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TMC7Q7Z402 723 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 DEPDC4Q8N2C3 294 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 TTC8Q8TAM2 541 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 MPP4Q96JB8 637 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 FAM126AQ9BYI3 521 aaPredicted RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 RBM28Q9NW13 759 aaKnown RBP4.66□□□□□ -1.66
CLHC1-201ENST00000401408 LMO7Q8WWI1 1683 aa4.66□□□□□ -1.66
CLHC1-201ENST00000401408 ERICH4A6NGS2 130 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 CCDC85CA6NKD9 419 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 TRIM6-TRIM34B2RNG4 842 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 FMNL1O95466 1100 aaPredicted RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 U2AF1L5P0DN76 240 aaPredicted RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 OAS2P29728 719 aaKnown RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 U2AF1Q01081 240 aaKnown RBP eCLIP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 NUCB1Q02818 461 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 MTMR3Q13615 1198 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 RSBN1LQ6PCB5 846 aaPredicted RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 LARP1Q6PKG0 1096 aaKnown RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 SNX32Q86XE0 403 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 HOMER1Q86YM7 354 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 SPIRE2Q8WWL2 714 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 DDX12PQ92771 950 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 JARID2Q92833 1246 aaPredicted RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 RPGRQ92834 1020 aaKnown RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 DEPDC7Q96QD5 511 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 CYLDQ9NQC7 956 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 C9orf78Q9NZ63 289 aaPredicted RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 MAFFQ9ULX9 164 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 RBM19Q9Y4C8 960 aaKnown RBP4.65□□□□□ -1.66
CLHC1-201ENST00000401408 WDR90Q96KV7 1748 aa4.65□□□□□ -1.66
CLHC1-201ENST00000401408 PHRF1Q9P1Y6 1649 aaKnown RBP4.65□□□□□ -1.67
CLHC1-201ENST00000401408 FAM221BA6H8Z2 402 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 ZBTB7AO95365 584 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 EPB42P16452 691 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 MAPK8P45983 427 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 DCTN1Q14203 1278 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 PRPF38BQ5VTL8 546 aaKnown RBP4.65□□□□□ -1.67
CLHC1-201ENST00000401408 IQCEQ6IPM2 695 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 JMYQ8N9B5 988 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 PGBD4Q96DM1 585 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF594Q96JF6 807 aaPredicted RBP4.65□□□□□ -1.67
CLHC1-201ENST00000401408 MS4A4AQ96JQ5 239 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 SERINC2Q96SA4 455 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 C22orf23Q9BZE7 217 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 MTFR1LQ9H019 292 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 NEUROD4Q9HD90 331 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 SIRPGQ9P1W8 387 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.65□□□□□ -1.67
CLHC1-201ENST00000401408 CDV3Q9UKY7 258 aaKnown RBP4.65□□□□□ -1.67
CLHC1-201ENST00000401408 BOLA1Q9Y3E2 137 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 ATP7BP35670 1465 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 VPS8Q8N3P4 1428 aa4.65□□□□□ -1.67
CLHC1-201ENST00000401408 USP17L5A8MUK1 530 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 HNRNPCP07910 306 aaKnown RBP eCLIP4.64□□□□□ -1.673e-6■□□□□ 11
CLHC1-201ENST00000401408 SLC4A3P48751 1232 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 ZNF132P52740 706 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 FMR1Q06787 632 aaKnown RBP eCLIP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 IFT88Q13099 833 aa4.64□□□□□ -1.67
CLHC1-201ENST00000401408 PUM3Q15397 648 aaKnown RBP4.64□□□□□ -1.67
CLHC1-201ENST00000401408 SWI5Q1ZZU3 235 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms