RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 DDX60Q8IY21 1712 aaKnown RBP16.8■□□□□ 0.28
CCDC144A-205ENST00000399264 LPIN2Q92539 896 aa16.8■□□□□ 0.28
CCDC144A-205ENST00000399264 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC144A-205ENST00000399264 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
CCDC144A-205ENST00000399264 IGSF3O75054 1194 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 BMP6P22004 513 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 SLC12A7Q9Y666 1083 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 NUP98P52948 1817 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 PATL2C9JE40 543 aaKnown RBP16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 TOB1P50616 345 aaPredicted RBP16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 NR5A1Q13285 461 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 ADGRA1Q86SQ6 560 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 ZNF34Q8IZ26 560 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 LRRN4CLQ8ND94 238 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 ZNF512BQ96KM6 892 aaPredicted RBP16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 BCL9O00512 1426 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 ABCC12Q96J65 1359 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 WDR19Q8NEZ3 1342 aa16.79■□□□□ 0.28
CCDC144A-205ENST00000399264 FANCCQ00597 558 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 BAZ2BQ9UIF8 2168 aaKnown RBP16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 MYH3P11055 1940 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 MPHOSPH8Q99549 860 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 PAXBP1Q9Y5B6 917 aa16.78■□□□□ 0.28
CCDC144A-205ENST00000399264 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
CCDC144A-205ENST00000399264 SLC4A4Q9Y6R1 1079 aa16.77■□□□□ 0.28
CCDC144A-205ENST00000399264 ATRNO75882 1429 aa16.77■□□□□ 0.28
CCDC144A-205ENST00000399264 SGMS1Q86VZ5 419 aa16.77■□□□□ 0.27
CCDC144A-205ENST00000399264 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.27
CCDC144A-205ENST00000399264 TMEM87BQ96K49 555 aa16.77■□□□□ 0.27
CCDC144A-205ENST00000399264 FANCLQ9NW38 375 aa16.77■□□□□ 0.27
CCDC144A-205ENST00000399264 ABCA3Q99758 1704 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 FAM205CA6NFA0 338 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 NEMFO60524 1076 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 TDO2P48775 406 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 EVX2Q03828 476 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 MAP3K12Q12852 859 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 PDILTQ8N807 584 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 TUBE1Q9UJT0 475 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 KCNH3Q9ULD8 1083 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 CDKL5O76039 1030 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
CCDC144A-205ENST00000399264 COL4A1P02462 1669 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 TRIM29Q14134 588 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 PCDHB6Q9Y5E3 794 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 LRP6O75581 1613 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 EXOC5O00471 708 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 SLC5A1P13866 664 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 ABCF2Q9UG63 623 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 GOLGB1Q14789 3259 aaKnown RBP16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
CCDC144A-205ENST00000399264 PPP6R2O75170 966 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 NOSTRINQ8IVI9 506 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 KCNQ4P56696 695 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 UBASH3AP57075 661 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 LRP2BPQ9P2M1 347 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 PRDM1O75626 825 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 FMNL1O95466 1100 aaPredicted RBP16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 SERPINC1P01008 464 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 LIFRP42702 1097 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 GSDMDP57764 484 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 ALX1Q15699 326 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 KRBA2Q6ZNG9 492 aa16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 TRMT44Q8IYL2 757 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-205ENST00000399264 INTS13Q9NVM9 706 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms