RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 OGFOD1Q8N543 542 aa19.78■□□□□ 0.76
CDH23-204ENST00000398792 USP40Q9NVE5 1235 aa19.78■□□□□ 0.76
CDH23-204ENST00000398792 USP17L12C9JPN9 530 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 USP17L21D6R901 530 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 USP17L8P0C7I0 530 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 RPS6KB1P23443 525 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 CTDSPL2Q05D32 466 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 MCM9Q9NXL9 1143 aa19.77■□□□□ 0.76
CDH23-204ENST00000398792 NEDD4P46934 1319 aa19.77■□□□□ 0.75
CDH23-204ENST00000398792 SRCAPQ6ZRS2 3230 aa19.77■□□□□ 0.75
CDH23-204ENST00000398792 MINDY4BA8MYZ0 360 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 WDHD1O75717 1129 aaPredicted RBP19.76■□□□□ 0.75
CDH23-204ENST00000398792 HMGB1P09429 215 aaKnown RBP19.76■□□□□ 0.75
CDH23-204ENST00000398792 STAG1Q8WVM7 1258 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 ROBO3Q96MS0 1386 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 AKNAD1Q5T1N1 836 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 NCOA7Q8NI08 942 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 PDRG1Q9NUG6 133 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 RNF181Q9P0P0 153 aa19.76■□□□□ 0.75
CDH23-204ENST00000398792 MYH1P12882 1939 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 CYP2D6P10635 497 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 MMP14P50281 582 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 GPR162Q16538 588 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
CDH23-204ENST00000398792 MB21D2Q8IYB1 491 aaPredicted RBP19.75■□□□□ 0.75
CDH23-204ENST00000398792 DDX4Q9NQI0 724 aaKnown RBP19.75■□□□□ 0.75
CDH23-204ENST00000398792 TACC3Q9Y6A5 838 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 GJA3Q9Y6H8 435 aa19.75■□□□□ 0.75
CDH23-204ENST00000398792 SMIM22K7EJ46 135 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 K7ELQ4 463 aaPredicted RBP19.74■□□□□ 0.75
CDH23-204ENST00000398792 MCM2P49736 904 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 GMPSP49915 693 aaPredicted RBP19.74■□□□□ 0.75
CDH23-204ENST00000398792 AK2P54819 239 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 TRDNQ13061 729 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 PICALMQ13492 652 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 AMOTL1Q8IY63 956 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 MTMR14Q8NCE2 650 aa19.74■□□□□ 0.75
CDH23-204ENST00000398792 RNF41Q9H4P4 317 aaPredicted RBP19.74■□□□□ 0.75
CDH23-204ENST00000398792 ZNF280AP59817 542 aaPredicted RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 EVX2Q03828 476 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 DLGAP5Q15398 846 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 C12orf60Q5U649 245 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 MFSD6Q6ZSS7 791 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 DHX32Q7L7V1 743 aaKnown RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 DPF2Q92785 391 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 PRMT6Q96LA8 375 aaPredicted RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 CNNM2Q9H8M5 875 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 SAP30BPQ9UHR5 308 aaKnown RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 NFIAQ12857 509 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 GPC2Q8N158 579 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 ZBED3Q96IU2 234 aaPredicted RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 IDI2Q9BXS1 227 aa19.73■□□□□ 0.75
CDH23-204ENST00000398792 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 ALDH8A1Q9H2A2 487 aaPredicted RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 TDRD3Q9H7E2 651 aaKnown RBP19.73■□□□□ 0.75
CDH23-204ENST00000398792 PCP11498 1178 aaKnown RBP19.72■□□□□ 0.75
CDH23-204ENST00000398792 SLC4A3P48751 1232 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 CACNB3P54284 484 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 EXOSC10Q01780 885 aaKnown RBP19.72■□□□□ 0.75
CDH23-204ENST00000398792 SLC4A8Q2Y0W8 1093 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 C9orf131Q5VYM1 1079 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 KRT23Q9C075 422 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 MYOZ2Q9NPC6 264 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 INCENPQ9NQS7 918 aa19.72■□□□□ 0.75
CDH23-204ENST00000398792 WDR19Q8NEZ3 1342 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 B4E1Z4 1266 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 GRIN3BO60391 1043 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
CDH23-204ENST00000398792 POLR3DP05423 398 aaPredicted RBP19.71■□□□□ 0.75
CDH23-204ENST00000398792 SLC3A2P08195 630 aaKnown RBP19.71■□□□□ 0.75
CDH23-204ENST00000398792 FGRP09769 529 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 MICALL2Q8IY33 904 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 STK11IPQ8N1F8 1099 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 NKX2-3Q8TAU0 364 aa19.71■□□□□ 0.75
CDH23-204ENST00000398792 DAXXQ9UER7 740 aaPredicted RBP19.71■□□□□ 0.75
CDH23-204ENST00000398792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.75
CDH23-204ENST00000398792 COL2A1P02458 1487 aaPredicted RBP19.71■□□□□ 0.75
CDH23-204ENST00000398792 MCM5P33992 734 aa19.7■□□□□ 0.74
CDH23-204ENST00000398792 ANTXR2P58335 489 aa19.7■□□□□ 0.74
CDH23-204ENST00000398792 TOB2Q14106 344 aaPredicted RBP19.7■□□□□ 0.74
CDH23-204ENST00000398792 SPDYE2Q495Y8 402 aa19.7■□□□□ 0.74
CDH23-204ENST00000398792 NOL8Q76FK4 1167 aaKnown RBP19.7■□□□□ 0.74
CDH23-204ENST00000398792 FAM198AQ9UFP1 575 aa19.7■□□□□ 0.74
CDH23-204ENST00000398792 PRC1O43663 620 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 PLCD1P51178 756 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 Q6ZUG5 572 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 CYB5R4Q7L1T6 521 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 TOMM22Q9NS69 142 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 SIPA1L1O43166 1804 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 WNT10BO00744 389 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 ORC4O43929 436 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 KDM4AO75164 1064 aa19.69■□□□□ 0.74
CDH23-204ENST00000398792 RRP12Q5JTH9 1297 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms