RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LIG1P18858 919 aa5.15□□□□□ -1.59
CD47-203ENST00000398258 MPSTP25325 297 aa5.15□□□□□ -1.59
CD47-203ENST00000398258 EIF1AXP47813 144 aaKnown RBP5.15□□□□□ -1.59
CD47-203ENST00000398258 ZP2Q05996 745 aa5.15□□□□□ -1.59
CD47-203ENST00000398258 CORO1BQ9BR76 489 aa5.15□□□□□ -1.59
CD47-203ENST00000398258 ZNF862O60290 1169 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
CD47-203ENST00000398258 NEFMP07197 916 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 GGNQ86UU5 652 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 SPACA3Q8IXA5 215 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 SNX29Q8TEQ0 813 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 CLP1Q92989 425 aaKnown RBP5.14□□□□□ -1.59
CD47-203ENST00000398258 DIRC2Q96SL1 478 aa5.14□□□□□ -1.59
CD47-203ENST00000398258 CCDC86Q9H6F5 360 aaKnown RBP5.14□□□□□ -1.59
CD47-203ENST00000398258 PDIA4P13667 645 aaKnown RBP5.13□□□□□ -1.59
CD47-203ENST00000398258 IKZF1Q13422 519 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 MTMR3Q13615 1198 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 PDE3AQ14432 1141 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 TTLL4Q14679 1199 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 NOM1Q5C9Z4 860 aaKnown RBP5.13□□□□□ -1.59
CD47-203ENST00000398258 SMYD4Q8IYR2 804 aaPredicted RBP5.13□□□□□ -1.59
CD47-203ENST00000398258 HELQQ8TDG4 1101 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 ZFYVE28Q9HCC9 887 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 AMOTL2Q9Y2J4 779 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 SYNGAP1Q96PV0 1343 aa5.13□□□□□ -1.59
CD47-203ENST00000398258 A0A0G2JLL6 359 aaPredicted RBP5.12□□□□□ -1.59
CD47-203ENST00000398258 HCLS1P14317 486 aaPredicted RBP5.12□□□□□ -1.59
CD47-203ENST00000398258 KCNA10Q16322 511 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 NKPD1Q17RQ9 610 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 TOP6BLQ8N6T0 577 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 RETREG2Q8NC44 543 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 ZC3H12CQ9C0D7 883 aaKnown RBP5.12□□□□□ -1.59
CD47-203ENST00000398258 TMPRSS5Q9H3S3 457 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 ZNF576Q9H609 170 aa5.12□□□□□ -1.59
CD47-203ENST00000398258 NSUN3Q9H649 340 aaKnown RBP5.12□□□□□ -1.59
CD47-203ENST00000398258 NFIBO00712 420 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 ATG7O95352 703 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 PDE4CQ08493 712 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 MPZL3Q6UWV2 235 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 ATG14Q6ZNE5 492 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 KIRREL1Q96J84 757 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 LIN7BQ9HAP6 207 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 USTQ9Y2C2 406 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 SNX11Q9Y5W9 270 aa5.11□□□□□ -1.59
CD47-203ENST00000398258 AFMP43652 599 aa5.1□□□□□ -1.59
CD47-203ENST00000398258 ID3Q02535 119 aa5.1□□□□□ -1.59
CD47-203ENST00000398258 HP1BP3Q5SSJ5 553 aaPredicted RBP5.1□□□□□ -1.59
CD47-203ENST00000398258 FBXO15Q8NCQ5 510 aaPredicted RBP5.1□□□□□ -1.59
CD47-203ENST00000398258 PIDD1Q9HB75 910 aa5.1□□□□□ -1.59
CD47-203ENST00000398258 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
CD47-203ENST00000398258 MED14OSP0DP75 135 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 PCSK2P16519 638 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 TRIM26Q12899 539 aaPredicted RBP5.09□□□□□ -1.59
CD47-203ENST00000398258 USPL1Q5W0Q7 1092 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 UBE3DQ7Z6J8 389 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 RELTQ969Z4 430 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 ISL2Q96A47 359 aa5.09□□□□□ -1.59
CD47-203ENST00000398258 SMG5Q9UPR3 1016 aaKnown RBP5.09□□□□□ -1.59
CD47-203ENST00000398258 FZD6O60353 706 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
CD47-203ENST00000398258 ATP2B4P23634 1241 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 ITPKAP23677 461 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 FAAP100Q0VG06 881 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 KIF4BQ2VIQ3 1234 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 TMEM67Q5HYA8 995 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 ARHGAP27Q6ZUM4 889 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 CYFIP1Q7L576 1253 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 GALNT12Q8IXK2 581 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 ASB11Q8WXH4 323 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 ATXN3LQ9H3M9 355 aa5.08□□□□□ -1.6
CD47-203ENST00000398258 CARS2Q9HA77 564 aaKnown RBP5.08□□□□□ -1.6
CD47-203ENST00000398258 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
CD47-203ENST00000398258 RNGTTO60942 597 aaKnown RBP5.07□□□□□ -1.6
CD47-203ENST00000398258 ZNF157P51786 506 aaPredicted RBP5.07□□□□□ -1.6
CD47-203ENST00000398258 LINC00310P59036 64 aa5.07□□□□□ -1.6
CD47-203ENST00000398258 CNTNAP4Q9C0A0 1308 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 TMEM88BA6NKF7 163 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 CIAPIN1Q6FI81 312 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 LSRQ86X29 649 aaPredicted RBP5.06□□□□□ -1.6
CD47-203ENST00000398258 GJD3Q8N144 294 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 TTC16Q8NEE8 873 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 GTF3C2Q8WUA4 911 aaPredicted RBP5.06□□□□□ -1.6
CD47-203ENST00000398258 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 ZFYVE1Q9HBF4 777 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 CCDC87Q9NVE4 849 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 PCOLCE2Q9UKZ9 415 aa5.06□□□□□ -1.6
CD47-203ENST00000398258 SUV39H1O43463 412 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 TMEM253P0C7T8 217 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 GLDCP23378 1020 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 NTF4P34130 210 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 NFKB2Q00653 900 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 AP3B2Q13367 1082 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 PDZD3Q86UT5 571 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 IRF2BPLQ9H1B7 796 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 ATP13A1Q9HD20 1204 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 SEMA3GQ9NS98 782 aa5.05□□□□□ -1.6
CD47-203ENST00000398258 PRR33A8MZF0 331 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 IGF2BP3O00425 579 aaKnown RBP eCLIP5.04□□□□□ -1.6
CD47-203ENST00000398258 NUAK1O60285 661 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms