RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 HOXB7P09629 217 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 PDE4BQ07343 736 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
TRIM39-203ENST00000396547 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 HAUS7Q99871 368 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM39-203ENST00000396547 CWC15Q9P013 229 aaKnown RBP11.29□□□□□ -0.6
TRIM39-203ENST00000396547 PCDHA5Q9Y5H7 936 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 COBLO75128 1261 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
TRIM39-203ENST00000396547 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 VSTM4Q8IW00 320 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 GRAMD1CQ8IYS0 662 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 GOLGA1Q92805 767 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 HSD3B7Q9H2F3 369 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 CDC27P30260 824 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 ATL3Q6DD88 541 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
TRIM39-203ENST00000396547 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 KCND1Q9NSA2 647 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM39-203ENST00000396547 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 ARHGAP6O43182 974 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 APPP05067 770 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 STX17P56962 302 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
TRIM39-203ENST00000396547 JAKMIP3Q5VZ66 844 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
TRIM39-203ENST00000396547 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
TRIM39-203ENST00000396547 LRP5O75197 1615 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 M0R2C6 588 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 CMA1P23946 247 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 ANKRD24Q8TF21 1146 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.6
TRIM39-203ENST00000396547 ALG1Q9BT22 464 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 MYL10Q9BUA6 226 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 TSPYL1Q9H0U9 437 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.6
TRIM39-203ENST00000396547 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.6
TRIM39-203ENST00000396547 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 YEATS4O95619 227 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 ZNF569Q5MCW4 686 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-203ENST00000396547 GDAP1L1Q96MZ0 367 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 HINFPQ9BQA5 517 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 FAN1Q9Y2M0 1017 aa11.27□□□□□ -0.61
TRIM39-203ENST00000396547 BTAF1O14981 1849 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 MAST3O60307 1309 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 EVA1CP58658 441 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 SHC4Q6S5L8 630 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 KIF23Q02241 960 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 OSBP2Q969R2 916 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 BPIFA3Q9BQP9 254 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 MRFAP1Q9Y605 127 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 ITGB4P16144 1822 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 MEGF6O75095 1541 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 CEMIPQ8WUJ3 1361 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 NEDD4P46934 1319 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 IKBKBO14920 756 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 TUBB4AP04350 444 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 TXLNAP40222 546 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 FAM193AP78312 1265 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
TRIM39-203ENST00000396547 SECISBP2LQ93073 1101 aaKnown RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-203ENST00000396547 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 IMMTQ16891 758 aaKnown RBP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 KCNH3Q9ULD8 1083 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 ACTN2P35609 894 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 PDIA6Q15084 440 aa11.25□□□□□ -0.61
TRIM39-203ENST00000396547 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
TRIM39-203ENST00000396547 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms