RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ANAPC4Q9UJX5 808 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 ERICH2A1L162 156 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 GPSM2P81274 684 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 SPTY2D1Q68D10 685 aaPredicted RBP14.17□□□□□ -0.14
ITGB1-202ENST00000396033 SYNE3Q6ZMZ3 975 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 CDC27P30260 824 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 WTAPQ15007 396 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 RNF214Q8ND24 703 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 ZNF396Q96N95 335 aaPredicted RBP14.17□□□□□ -0.14
ITGB1-202ENST00000396033 ESPNB1AK53 854 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 UFL1O94874 794 aa14.17□□□□□ -0.14
ITGB1-202ENST00000396033 CRNKL1Q9BZJ0 848 aaKnown RBP14.17□□□□□ -0.14
ITGB1-202ENST00000396033 CCDC173Q0VFZ6 552 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 BAZ2AQ9UIF9 1905 aaKnown RBP14.16□□□□□ -0.14
ITGB1-202ENST00000396033 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 CYP2D7A0A087X1C5 515 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 LIG1P18858 919 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 ZNF827Q17R98 1081 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 FBXO18Q8NFZ0 1043 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 WDR66Q8TBY9 1149 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 ESR2Q92731 530 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 UBAC1Q9BSL1 405 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
ITGB1-202ENST00000396033 ZBTB22O15209 634 aa14.16□□□□□ -0.14
ITGB1-202ENST00000396033 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
ITGB1-202ENST00000396033 SMIM22K7EJ46 135 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
ITGB1-202ENST00000396033 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
ITGB1-202ENST00000396033 PHKBQ93100 1093 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 USP28Q96RU2 1077 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 MTA3Q9BTC8 594 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 GGA1Q9UJY5 639 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 DUOX1Q9NRD9 1551 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 APBA3O96018 575 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 LDHBP07195 334 aaKnown RBP14.15□□□□□ -0.14
ITGB1-202ENST00000396033 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
ITGB1-202ENST00000396033 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 CTR9Q6PD62 1173 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 GJB4Q9NTQ9 266 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
ITGB1-202ENST00000396033 C15orf52Q6ZUT6 534 aaKnown RBP14.14□□□□□ -0.15
ITGB1-202ENST00000396033 USP17L12C9JPN9 530 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 USP17L21D6R901 530 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 BBOX1O75936 387 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
ITGB1-202ENST00000396033 DCP1AQ9NPI6 582 aaPredicted RBP14.14□□□□□ -0.15
ITGB1-202ENST00000396033 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
ITGB1-202ENST00000396033 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
ITGB1-202ENST00000396033 NTRK3Q16288 839 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 TMTC2Q8N394 836 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 TNKSO95271 1327 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 NID2Q14112 1375 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 RANBP6O60518 1105 aaKnown RBP14.13□□□□□ -0.15
ITGB1-202ENST00000396033 RTN1Q16799 776 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
ITGB1-202ENST00000396033 ATP8A2Q9NTI2 1148 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 RCOR1Q9UKL0 485 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 PLSCR1O15162 318 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 PRDM1O75626 825 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 CRAMP1Q96RY5 1269 aa14.13□□□□□ -0.15
ITGB1-202ENST00000396033 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
ITGB1-202ENST00000396033 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 BRAPQ7Z569 592 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 PPP1R9BQ96SB3 815 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 PCP11498 1178 aaKnown RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 COL23A1Q86Y22 540 aaPredicted RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 ARPP21Q9UBL0 812 aaPredicted RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 ECM29Q5VYK3 1845 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 LAMB1P07942 1786 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 STK36Q9NRP7 1315 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 GSTO1P78417 241 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 KIF23Q02241 960 aaPredicted RBP14.12□□□□□ -0.15
ITGB1-202ENST00000396033 CAMK4Q16566 473 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 CD209Q9NNX6 404 aa14.12□□□□□ -0.15
ITGB1-202ENST00000396033 KLRG2A4D1S0 409 aaPredicted RBP14.11□□□□□ -0.15
ITGB1-202ENST00000396033 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 RGS22Q8NE09 1264 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
ITGB1-202ENST00000396033 PPEF1O14829 653 aaPredicted RBP14.11□□□□□ -0.15
ITGB1-202ENST00000396033 TRIM29Q14134 588 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 SEC23AQ15436 765 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 KRT40Q6A162 431 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 TNMDQ9H2S6 317 aa14.11□□□□□ -0.15
ITGB1-202ENST00000396033 IGSF3O75054 1194 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms