RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 AKNAD1Q5T1N1 836 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 APOBEC3HQ6NTF7 200 aaKnown RBP24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 MAPKAPK5Q8IW41 473 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 AGBL3Q8NEM8 1001 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 GMLQ99445 158 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 USP40Q9NVE5 1235 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 MKRN1Q9UHC7 482 aaKnown RBP24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 ANAPC4Q9UJX5 808 aa24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 ZBTB12Q9Y330 459 aaPredicted RBP24.18■■□□□ 1.46
VCPKMT-202ENST00000395860 DDX60LQ5H9U9 1706 aaKnown RBP24.17■■□□□ 1.46
VCPKMT-202ENST00000395860 EIF6P56537 245 aaKnown RBP24.17■■□□□ 1.46
VCPKMT-202ENST00000395860 SBK1Q52WX2 424 aa24.17■■□□□ 1.46
VCPKMT-202ENST00000395860 MFSD6Q6ZSS7 791 aa24.17■■□□□ 1.46
VCPKMT-202ENST00000395860 AMOTL1Q8IY63 956 aa24.17■■□□□ 1.46
VCPKMT-202ENST00000395860 CYP2D7A0A087X1C5 515 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 STK11IPQ8N1F8 1099 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 OGFOD1Q8N543 542 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 STAG1Q8WVM7 1258 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 ALDH8A1Q9H2A2 487 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 RNF41Q9H4P4 317 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 FLT1P17948 1338 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 USP17L8P0C7I0 530 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 ANKRD1Q15327 319 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 CDC42EP5Q6NZY7 148 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 MB21D2Q8IYB1 491 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 CNNM2Q9H8M5 875 aa24.16■■□□□ 1.46
VCPKMT-202ENST00000395860 NEDD4P46934 1319 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 FZD9O00144 591 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 LMNB1P20700 586 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 CFAP100Q494V2 611 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 SPRYD3Q8NCJ5 442 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 KRT23Q9C075 422 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 PCDHAC2Q9Y5I4 1007 aa24.15■■□□□ 1.46
VCPKMT-202ENST00000395860 HSP90AA1P07900 732 aaKnown RBP24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 YBX3P16989 372 aaKnown RBP eCLIP24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 MCM5P33992 734 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 FGD1P98174 961 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 EXOSC10Q01780 885 aaKnown RBP24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 Q6ZUG5 572 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 TMX3Q96JJ7 454 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 INCENPQ9NQS7 918 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 TOMM22Q9NS69 142 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 LIMCH1Q9UPQ0 1083 aa24.14■■□□□ 1.46
VCPKMT-202ENST00000395860 B4E1Z4 1266 aa24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 SOCS7O14512 581 aa24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 SLC3A2P08195 630 aaKnown RBP24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 CYP2D6P10635 497 aa24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 PICALMQ13492 652 aa24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 CHST3Q7LGC8 479 aa24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 LARP6Q9BRS8 491 aaKnown RBP24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 SAP30BPQ9UHR5 308 aaKnown RBP24.14■■□□□ 1.45
VCPKMT-202ENST00000395860 POLR3DP05423 398 aaPredicted RBP24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 SLC4A8Q2Y0W8 1093 aa24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 RRP12Q5JTH9 1297 aaKnown RBP24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 C12orf60Q5U649 245 aa24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 LRRC2Q9BYS8 371 aa24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 TACC3Q9Y6A5 838 aa24.13■■□□□ 1.45
VCPKMT-202ENST00000395860 SMIM22K7EJ46 135 aa24.12■■□□□ 1.45
VCPKMT-202ENST00000395860 WDHD1O75717 1129 aaPredicted RBP24.12■■□□□ 1.45
VCPKMT-202ENST00000395860 TOB2Q14106 344 aaPredicted RBP24.12■■□□□ 1.45
VCPKMT-202ENST00000395860 PRC1O43663 620 aa24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 PCP11498 1178 aaKnown RBP24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 WDR19Q8NEZ3 1342 aa24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 RPS12P25398 132 aaKnown RBP24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 DLGAP5Q15398 846 aa24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 GJA3Q9Y6H8 435 aa24.11■■□□□ 1.45
VCPKMT-202ENST00000395860 KDM4AO75164 1064 aa24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 ANTXR2P58335 489 aa24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 EVX2Q03828 476 aa24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 CYB5R4Q7L1T6 521 aa24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 PRMT6Q96LA8 375 aaPredicted RBP24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 ZSCAN31Q96LW9 406 aaPredicted RBP24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 DDX4Q9NQI0 724 aaKnown RBP24.1■■□□□ 1.45
VCPKMT-202ENST00000395860 PDE4BQ07343 736 aa24.09■■□□□ 1.45
VCPKMT-202ENST00000395860 BRF1Q92994 677 aa24.09■■□□□ 1.45
VCPKMT-202ENST00000395860 TDRD3Q9H7E2 651 aaKnown RBP24.09■■□□□ 1.45
VCPKMT-202ENST00000395860 ZNF541Q9H0D2 1346 aa24.09■■□□□ 1.45
VCPKMT-202ENST00000395860 ROBO3Q96MS0 1386 aa24.09■■□□□ 1.45
VCPKMT-202ENST00000395860 SPDYE2BA6NHP3 402 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 FGRP09769 529 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 SPDYE6P0CI01 402 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 FOXD4L1Q9NU39 408 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 ZSWIM5Q9P217 1185 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 TPCN1Q9ULQ1 816 aa24.08■■□□□ 1.45
VCPKMT-202ENST00000395860 MMP14P50281 582 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 PLCD1P51178 756 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 NKX2-3Q8TAU0 364 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 ESR2Q92731 530 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 IDI2Q9BXS1 227 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 AGXT2Q9BYV1 514 aa24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 OSBPL5Q9H0X9 879 aaPredicted RBP24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 SH2B1Q9NRF2 756 aaPredicted RBP24.08■■□□□ 1.44
VCPKMT-202ENST00000395860 CACNB3P54284 484 aa24.07■■□□□ 1.44
VCPKMT-202ENST00000395860 NFIAQ12857 509 aa24.07■■□□□ 1.44
VCPKMT-202ENST00000395860 FBXL16Q8N461 479 aa24.07■■□□□ 1.44
VCPKMT-202ENST00000395860 SLKQ9H2G2 1235 aaPredicted RBP24.07■■□□□ 1.44
VCPKMT-202ENST00000395860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.07■■□□□ 1.44
VCPKMT-202ENST00000395860 MYH8P13535 1937 aa24.06■■□□□ 1.44
VCPKMT-202ENST00000395860 PRDM1O75626 825 aa24.06■■□□□ 1.44
VCPKMT-202ENST00000395860 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms