RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 USP27XA6NNY8 438 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 ZBED6P86452 979 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 FILIP1LQ4L180 1135 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 AKNAD1Q5T1N1 836 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 TAX1BP1Q86VP1 789 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 MTA3Q9BTC8 594 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 FUT8Q9BYC5 575 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
MSH5-205ENST00000395853 SRGAP3O43295 1099 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 ACBD5Q5T8D3 534 aaPredicted RBP10.16□□□□□ -0.78
MSH5-205ENST00000395853 LRRN4CLQ8ND94 238 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 FAM81AQ8TBF8 368 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 SYNPO2Q9UMS6 1093 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 FRMD4BQ9Y2L6 1034 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 RTL1A6NKG5 1358 aa10.16□□□□□ -0.78
MSH5-205ENST00000395853 RHBDL3P58872 404 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 DHX8Q14562 1220 aaKnown RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 KCNB1Q14721 858 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 HSP90B2PQ58FF3 399 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 RRP12Q5JTH9 1297 aaKnown RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 ZGPATQ8N5A5 531 aaKnown RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 USHBP1Q8N6Y0 703 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 CACTINQ8WUQ7 758 aaKnown RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 RBM17Q96I25 401 aaKnown RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 TRIM7Q9C029 511 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 ABCC4O15439 1325 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 NEMFO60524 1076 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 INPP5BP32019 993 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 ISM2Q6H9L7 571 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 CXorf38Q8TB03 319 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 SYTL4Q96C24 671 aaPredicted RBP10.15□□□□□ -0.78
MSH5-205ENST00000395853 PLEKHA4Q9H4M7 779 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 TMOD4Q9NZQ9 345 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
MSH5-205ENST00000395853 IPO5O00410 1097 aaKnown RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 ZNF24P17028 368 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 CDR1P51861 262 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 INF2Q27J81 1249 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 OR8K1Q8NGG5 319 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 FAM169AQ9Y6X4 670 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 C5P01031 1676 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 EPB41L2O43491 1005 aaKnown RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 C16orf87Q6PH81 154 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 KIAA0825Q8IV33 1275 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 FUCA2Q9BTY2 467 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 MMADHCQ9H3L0 296 aaPredicted RBP10.14□□□□□ -0.79
MSH5-205ENST00000395853 BATF3Q9NR55 127 aa10.14□□□□□ -0.79
MSH5-205ENST00000395853 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 EPAS1Q99814 870 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 EFCAB8A8MWE9 144 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 EBAG9O00559 213 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 THEMIS2Q5TEJ8 643 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 MAB21L3Q8N8X9 362 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 API5Q9BZZ5 524 aaKnown RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 UTP6Q9NYH9 597 aaKnown RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 TAF1LQ8IZX4 1826 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 RGPD2P0DJD1 1756 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 SYNRGQ9UMZ2 1314 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 EZRP15311 586 aaKnown RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 MAGEA10P43363 369 aaPredicted RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 GJA8P48165 433 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 APOBRQ0VD83 1088 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 SFMBT2Q5VUG0 894 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 CCAR2Q8N163 923 aaKnown RBP10.13□□□□□ -0.79
MSH5-205ENST00000395853 CNNM3Q8NE01 707 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 CCDC114Q96M63 670 aa10.13□□□□□ -0.79
MSH5-205ENST00000395853 MEGF6O75095 1541 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 CICQ96RK0 1608 aaPredicted RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 SHTN1A0MZ66 631 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 SPDYE3A6NKU9 549 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 SASH1O94885 1247 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 IFT88Q13099 833 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 LRRC8AQ8IWT6 810 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 KIRREL3Q8IZU9 778 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 CEP112Q8N8E3 955 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 HELBQ8NG08 1087 aaPredicted RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 TRMT1Q9NXH9 659 aaKnown RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 MAP2K7O14733 419 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms