RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 VEZTQ9HBM0 779 aa11.21□□□□□ -0.61
PC-201ENST00000393955 COL4A1P02462 1669 aa11.21□□□□□ -0.61
PC-201ENST00000393955 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
PC-201ENST00000393955 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.61
PC-201ENST00000393955 ESR2Q92731 530 aa11.21□□□□□ -0.61
PC-201ENST00000393955 DNAJC25Q9H1X3 360 aa11.21□□□□□ -0.61
PC-201ENST00000393955 KAT14Q9H8E8 782 aa11.21□□□□□ -0.61
PC-201ENST00000393955 SALL1Q9NSC2 1324 aa11.21□□□□□ -0.62
PC-201ENST00000393955 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.62
PC-201ENST00000393955 HSPA1LP34931 641 aa11.21□□□□□ -0.62
PC-201ENST00000393955 ANTXR2P58335 489 aa11.21□□□□□ -0.62
PC-201ENST00000393955 GTF2IP78347 998 aa11.21□□□□□ -0.62
PC-201ENST00000393955 JMYQ8N9B5 988 aa11.21□□□□□ -0.62
PC-201ENST00000393955 ISCA1Q9BUE6 129 aa11.21□□□□□ -0.62
PC-201ENST00000393955 TACC3Q9Y6A5 838 aa11.21□□□□□ -0.62
PC-201ENST00000393955 USP17L12C9JPN9 530 aa11.2□□□□□ -0.62
PC-201ENST00000393955 USP17L21D6R901 530 aa11.2□□□□□ -0.62
PC-201ENST00000393955 PDE4BQ07343 736 aa11.2□□□□□ -0.62
PC-201ENST00000393955 AIFM3Q96NN9 605 aa11.2□□□□□ -0.62
PC-201ENST00000393955 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
PC-201ENST00000393955 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
PC-201ENST00000393955 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
PC-201ENST00000393955 PFKFB2O60825 505 aa11.2□□□□□ -0.62
PC-201ENST00000393955 PTGS1P23219 599 aa11.2□□□□□ -0.62
PC-201ENST00000393955 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
PC-201ENST00000393955 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.2□□□□□ -0.62
PC-201ENST00000393955 ABCC6O95255 1503 aa11.2□□□□□ -0.62
PC-201ENST00000393955 ELP1O95163 1332 aa11.2□□□□□ -0.62
PC-201ENST00000393955 A0A1B0GVL5 298 aa11.2□□□□□ -0.62
PC-201ENST00000393955 SNW1Q13573 536 aaKnown RBP11.2□□□□□ -0.62
PC-201ENST00000393955 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
PC-201ENST00000393955 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
PC-201ENST00000393955 CDK5RAP3Q96JB5 506 aa11.2□□□□□ -0.62
PC-201ENST00000393955 HELLSQ9NRZ9 838 aa11.2□□□□□ -0.62
PC-201ENST00000393955 KCNJ14Q9UNX9 436 aa11.2□□□□□ -0.62
PC-201ENST00000393955 AFMP43652 599 aa11.19□□□□□ -0.62
PC-201ENST00000393955 NOLC1Q14978 699 aaKnown RBP eCLIP11.19□□□□□ -0.62
PC-201ENST00000393955 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
PC-201ENST00000393955 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
PC-201ENST00000393955 HEATR3Q7Z4Q2 680 aa11.19□□□□□ -0.62
PC-201ENST00000393955 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
PC-201ENST00000393955 HOOK1Q9UJC3 728 aaKnown RBP11.19□□□□□ -0.62
PC-201ENST00000393955 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
PC-201ENST00000393955 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
PC-201ENST00000393955 MCAMP43121 646 aa11.19□□□□□ -0.62
PC-201ENST00000393955 ZYXQ15942 572 aaKnown RBP11.19□□□□□ -0.62
PC-201ENST00000393955 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
PC-201ENST00000393955 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
PC-201ENST00000393955 DIXDC1Q155Q3 683 aa11.19□□□□□ -0.62
PC-201ENST00000393955 UVSSAQ2YD98 709 aa11.19□□□□□ -0.62
PC-201ENST00000393955 PTF1AQ7RTS3 328 aa11.19□□□□□ -0.62
PC-201ENST00000393955 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
PC-201ENST00000393955 PIH1D3Q9NQM4 214 aaKnown RBP11.19□□□□□ -0.62
PC-201ENST00000393955 CCDC196A0A1B0GTZ2 297 aa11.19□□□□□ -0.62
PC-201ENST00000393955 ITPK1Q13572 414 aa11.19□□□□□ -0.62
PC-201ENST00000393955 RBM43Q6ZSC3 357 aaKnown RBP11.19□□□□□ -0.62
PC-201ENST00000393955 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
PC-201ENST00000393955 NEDD4P46934 1319 aa11.18□□□□□ -0.62
PC-201ENST00000393955 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
PC-201ENST00000393955 KRT18P05783 430 aaKnown RBP11.18□□□□□ -0.62
PC-201ENST00000393955 KIAA0825Q8IV33 1275 aa11.18□□□□□ -0.62
PC-201ENST00000393955 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
PC-201ENST00000393955 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
PC-201ENST00000393955 CLSTN2Q9H4D0 955 aa11.18□□□□□ -0.62
PC-201ENST00000393955 TRPC5Q9UL62 973 aaPredicted RBP11.18□□□□□ -0.62
PC-201ENST00000393955 DCCP43146 1447 aa11.18□□□□□ -0.62
PC-201ENST00000393955 ITGB4P16144 1822 aa11.18□□□□□ -0.62
PC-201ENST00000393955 LDHCP07864 332 aa11.18□□□□□ -0.62
PC-201ENST00000393955 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
PC-201ENST00000393955 NAT10Q9H0A0 1025 aaKnown RBP11.18□□□□□ -0.62
PC-201ENST00000393955 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
PC-201ENST00000393955 SOS2Q07890 1332 aaPredicted RBP11.18□□□□□ -0.62
PC-201ENST00000393955 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
PC-201ENST00000393955 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
PC-201ENST00000393955 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
PC-201ENST00000393955 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
PC-201ENST00000393955 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
PC-201ENST00000393955 ZNF165P49910 485 aa11.17□□□□□ -0.62
PC-201ENST00000393955 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
PC-201ENST00000393955 TMX1Q9H3N1 280 aa11.17□□□□□ -0.62
PC-201ENST00000393955 TPM2P07951 284 aa11.17□□□□□ -0.62
PC-201ENST00000393955 MFSD14BQ5SR56 506 aa11.17□□□□□ -0.62
PC-201ENST00000393955 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
PC-201ENST00000393955 KRT27Q7Z3Y8 459 aa11.17□□□□□ -0.62
PC-201ENST00000393955 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
PC-201ENST00000393955 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
PC-201ENST00000393955 KRT23Q9C075 422 aa11.17□□□□□ -0.62
PC-201ENST00000393955 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
PC-201ENST00000393955 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
PC-201ENST00000393955 TXLNAP40222 546 aa11.17□□□□□ -0.62
PC-201ENST00000393955 CFAP100Q494V2 611 aa11.17□□□□□ -0.62
PC-201ENST00000393955 FAM200AQ8TCP9 573 aa11.17□□□□□ -0.62
PC-201ENST00000393955 RIPOR2Q9Y4F9 1068 aa11.17□□□□□ -0.62
PC-201ENST00000393955 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
PC-201ENST00000393955 PRKG1Q13976 671 aa11.16□□□□□ -0.62
PC-201ENST00000393955 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
PC-201ENST00000393955 CEP57L1Q8IYX8 460 aa11.16□□□□□ -0.62
PC-201ENST00000393955 STAMQ92783 540 aa11.16□□□□□ -0.62
PC-201ENST00000393955 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
PC-201ENST00000393955 ANGEL1Q9UNK9 670 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms