RNA–Protein interactions for RNA: ENST00000393786.7

SRPK3-205, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRPK3, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-205ENST00000393786 RTN4Q9NQC3 1192 aaKnown RBP27.62■■■□□ 2.01
SRPK3-205ENST00000393786 DDR1Q08345 913 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 WTAPQ15007 396 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 SPTY2D1Q68D10 685 aaPredicted RBP27.61■■■□□ 2.01
SRPK3-205ENST00000393786 CCDC144CPQ8IYA2 1237 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 TMTC2Q8N394 836 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 TDRD7Q8NHU6 1098 aaKnown RBP27.61■■■□□ 2.01
SRPK3-205ENST00000393786 ZKSCAN3Q9BRR0 538 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 FTOQ9C0B1 505 aaKnown RBP eCLIP27.61■■■□□ 2.01
SRPK3-205ENST00000393786 SMIM22K7EJ46 135 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 HMGB2P26583 209 aaKnown RBP27.61■■■□□ 2.01
SRPK3-205ENST00000393786 SYNE3Q6ZMZ3 975 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 RBM17Q96I25 401 aaKnown RBP27.61■■■□□ 2.01
SRPK3-205ENST00000393786 GJB4Q9NTQ9 266 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 DACT1Q9NYF0 836 aa27.61■■■□□ 2.01
SRPK3-205ENST00000393786 POLRMTO00411 1230 aaKnown RBP27.6■■■□□ 2.01
SRPK3-205ENST00000393786 IGSF3O75054 1194 aa27.6■■■□□ 2.01
SRPK3-205ENST00000393786 CTR9Q6PD62 1173 aa27.6■■■□□ 2.01
SRPK3-205ENST00000393786 ESR2Q92731 530 aa27.6■■■□□ 2.01
SRPK3-205ENST00000393786 PDLIM2Q96JY6 352 aa27.6■■■□□ 2.01
SRPK3-205ENST00000393786 NUP62CLQ9H1M0 184 aa27.6■■■□□ 2.01
SRPK3-205ENST00000393786 DDX19AQ9NUU7 478 aaKnown RBP27.6■■■□□ 2.01
SRPK3-205ENST00000393786 AATFQ9NY61 560 aaKnown RBP eCLIP27.6■■■□□ 2.01
SRPK3-205ENST00000393786 ERICH2A1L162 156 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 GPSM2P81274 684 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 BICD2Q8TD16 824 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 PHKBQ93100 1093 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 ALG1Q9BT22 464 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 JAG2Q9Y219 1238 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 FGRP09769 529 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 BRAPQ7Z569 592 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 WDR66Q8TBY9 1149 aa27.59■■■□□ 2.01
SRPK3-205ENST00000393786 TRIM44Q96DX7 344 aaPredicted RBP27.59■■■□□ 2.01
SRPK3-205ENST00000393786 CRNKL1Q9BZJ0 848 aaKnown RBP27.59■■■□□ 2.01
SRPK3-205ENST00000393786 KIAA1551Q9HCM1 1747 aa27.58■■■□□ 2.01
SRPK3-205ENST00000393786 DUOX1Q9NRD9 1551 aa27.58■■■□□ 2.01
SRPK3-205ENST00000393786 CYP2D7A0A087X1C5 515 aa27.58■■■□□ 2.01
SRPK3-205ENST00000393786 RANBP6O60518 1105 aaKnown RBP27.58■■■□□ 2.01
SRPK3-205ENST00000393786 IARSP41252 1262 aaKnown RBP27.58■■■□□ 2.01
SRPK3-205ENST00000393786 RTEL1Q9NZ71 1219 aa27.58■■■□□ 2.01
SRPK3-205ENST00000393786 HOXA10P31260 410 aaPredicted RBP27.57■■■□□ 2
SRPK3-205ENST00000393786 ZNF804AQ7Z570 1209 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 AIFM3Q96NN9 605 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 USP17L12C9JPN9 530 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 USP17L21D6R901 530 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 NR1I2O75469 434 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 PCP11498 1178 aaKnown RBP27.57■■■□□ 2
SRPK3-205ENST00000393786 RCAN1P53805 252 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 RBM6P78332 1123 aaKnown RBP27.57■■■□□ 2
SRPK3-205ENST00000393786 KIF23Q02241 960 aaPredicted RBP27.57■■■□□ 2
SRPK3-205ENST00000393786 SEC23AQ15436 765 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 UBAC1Q9BSL1 405 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 DCP1AQ9NPI6 582 aaPredicted RBP27.57■■■□□ 2
SRPK3-205ENST00000393786 ATP8A2Q9NTI2 1148 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 STK36Q9NRP7 1315 aa27.57■■■□□ 2
SRPK3-205ENST00000393786 ECM29Q5VYK3 1845 aa27.56■■■□□ 2
SRPK3-205ENST00000393786 KLRG2A4D1S0 409 aaPredicted RBP27.56■■■□□ 2
SRPK3-205ENST00000393786 BBOX1O75936 387 aa27.56■■■□□ 2
SRPK3-205ENST00000393786 IFNAR1P17181 557 aa27.56■■■□□ 2
SRPK3-205ENST00000393786 MAP3K11Q16584 847 aa27.56■■■□□ 2
SRPK3-205ENST00000393786 UVSSAQ2YD98 709 aa27.56■■■□□ 2
SRPK3-205ENST00000393786 DZIP1Q86YF9 867 aaKnown RBP27.56■■■□□ 2
SRPK3-205ENST00000393786 KIF28PB7ZC32 967 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 POLR3DP05423 398 aaPredicted RBP27.55■■■□□ 2
SRPK3-205ENST00000393786 ATP2B4P23634 1241 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 GPR101Q96P66 508 aaPredicted RBP27.55■■■□□ 2
SRPK3-205ENST00000393786 CLSTN2Q9H4D0 955 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 LDHBP07195 334 aaKnown RBP27.55■■■□□ 2
SRPK3-205ENST00000393786 SSRP1Q08945 709 aaKnown RBP27.55■■■□□ 2
SRPK3-205ENST00000393786 CAMK4Q16566 473 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 MYSM1Q5VVJ2 828 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 TNKSO95271 1327 aa27.55■■■□□ 2
SRPK3-205ENST00000393786 PLSCR1O15162 318 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 FMNL1O95466 1100 aaPredicted RBP27.54■■■□□ 2
SRPK3-205ENST00000393786 RTN1Q16799 776 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 KRT40Q6A162 431 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 RBM43Q6ZSC3 357 aaKnown RBP27.54■■■□□ 2
SRPK3-205ENST00000393786 CRAMP1Q96RY5 1269 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 TNMDQ9H2S6 317 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 MYH2Q9UKX2 1941 aa27.54■■■□□ 2
SRPK3-205ENST00000393786 UFL1O94874 794 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 ZNF654Q8IZM8 581 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 RRAGDQ9NQL2 400 aaPredicted RBP27.53■■■□□ 2
SRPK3-205ENST00000393786 SBK1Q52WX2 424 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 ZSCAN10Q96SZ4 725 aaPredicted RBP27.53■■■□□ 2
SRPK3-205ENST00000393786 SLC26A6Q9BXS9 759 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 POLR3EQ9NVU0 708 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 PODXL2Q9NZ53 605 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 GGA1Q9UJY5 639 aa27.53■■■□□ 2
SRPK3-205ENST00000393786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.53■■■□□ 2
SRPK3-205ENST00000393786 LAMB1P07942 1786 aa27.52■■■□□ 2
SRPK3-205ENST00000393786 CCDC192P0DO97 292 aa27.52■■■□□ 2
SRPK3-205ENST00000393786 ZNF772Q68DY9 489 aaPredicted RBP27.52■■■□□ 2
SRPK3-205ENST00000393786 LINC00301Q8NCQ3 95 aa27.52■■■□□ 2
SRPK3-205ENST00000393786 CCDC196A0A1B0GTZ2 297 aa27.51■■■□□ 2
SRPK3-205ENST00000393786 ZNF827Q17R98 1081 aa27.51■■■□□ 2
SRPK3-205ENST00000393786 CCAR1Q8IX12 1150 aaKnown RBP27.51■■■□□ 2
SRPK3-205ENST00000393786 FANCBQ8NB91 859 aa27.51■■■□□ 2
SRPK3-205ENST00000393786 CD209Q9NNX6 404 aa27.51■■■□□ 2
SRPK3-205ENST00000393786 ARPP21Q9UBL0 812 aaPredicted RBP27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms