RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 BECN2A8MW95 431 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 WASF1Q92558 559 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 ZNF202O95125 648 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 CHRNDQ07001 517 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
NLRP3-205ENST00000391827 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
NLRP3-205ENST00000391827 PFKFB1P16118 471 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 TMEM51Q9NW97 253 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
NLRP3-205ENST00000391827 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
NLRP3-205ENST00000391827 BCAMP50895 628 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
NLRP3-205ENST00000391827 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
NLRP3-205ENST00000391827 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
NLRP3-205ENST00000391827 SLC3A2P08195 630 aaKnown RBP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 NLRP12P59046 1061 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SSRP1Q08945 709 aaKnown RBP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 TRIM29Q14134 588 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 CACTINQ8WUQ7 758 aaKnown RBP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 PHKBQ93100 1093 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 COL4A1P02462 1669 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SNAP23O00161 211 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 LRMPQ12912 555 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 LRRC8AQ8IWT6 810 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 KCND1Q9NSA2 647 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
NLRP3-205ENST00000391827 RXRAP19793 462 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
NLRP3-205ENST00000391827 RESP18Q5W5W9 173 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 IMPACTQ9P2X3 320 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 CUTAO60888 179 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 TDO2P48775 406 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 UBE4AQ14139 1066 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 DPCR1Q3MIW9 517 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 IKBKBO14920 756 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 PRKAB2O43741 272 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
NLRP3-205ENST00000391827 ZRSR1Q15695 479 aaKnown RBP12.48□□□□□ -0.41
NLRP3-205ENST00000391827 SHC4Q6S5L8 630 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 OSBPL5Q9H0X9 879 aaPredicted RBP12.48□□□□□ -0.41
NLRP3-205ENST00000391827 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
NLRP3-205ENST00000391827 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
NLRP3-205ENST00000391827 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 ZBTB22O15209 634 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 MMP1P03956 469 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 GSDMDP57764 484 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 WTAPQ15007 396 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 PAXIP1Q6ZW49 1069 aaPredicted RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 GNL3LQ9NVN8 582 aaKnown RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 COL1A1P02452 1464 aaPredicted RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 SYKP43405 635 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 PPARAQ07869 468 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 RTN1Q16799 776 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 SLC26A6Q9BXS9 759 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
NLRP3-205ENST00000391827 PDS5AQ29RF7 1337 aaKnown RBP12.47□□□□□ -0.41
NLRP3-205ENST00000391827 ERICH2A1L162 156 aa12.46□□□□□ -0.41
NLRP3-205ENST00000391827 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
NLRP3-205ENST00000391827 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
NLRP3-205ENST00000391827 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
NLRP3-205ENST00000391827 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms