RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 CCDC42Q96M95 316 aa16.7■□□□□ 0.26
LRRK1-201ENST00000388948 CCDC77Q9BR77 488 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
LRRK1-201ENST00000388948 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
LRRK1-201ENST00000388948 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
LRRK1-201ENST00000388948 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 TACC1O75410 805 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 CHURC1Q8WUH1 139 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 ABCC2Q92887 1545 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 CCDC114Q96M63 670 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 ERICH4A6NGS2 130 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 APPBP2Q92624 585 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 DBNDD2Q9BQY9 259 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
LRRK1-201ENST00000388948 ADCY7P51828 1080 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 ANO6Q4KMQ2 910 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
LRRK1-201ENST00000388948 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
LRRK1-201ENST00000388948 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-201ENST00000388948 ESPNB1AK53 854 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 ANKRD35Q8N283 1001 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 FAM193BQ96PV7 902 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-201ENST00000388948 KIF5AQ12840 1032 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 PLCD1P51178 756 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 NOX5Q96PH1 765 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 NUP160Q12769 1436 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 FAM200AQ8TCP9 573 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 TMEM87BQ96K49 555 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
LRRK1-201ENST00000388948 BRAPQ7Z569 592 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 AOPEPQ8N6M6 819 aa16.68■□□□□ 0.26
LRRK1-201ENST00000388948 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-201ENST00000388948 DEXIO95424 95 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 CFAP58Q5T655 872 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 E7EVH7 732 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 PRAG1Q86YV5 1406 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 ALAS1P13196 640 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 G2E3Q7L622 706 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 SORBS3O60504 671 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 ABL1P00519 1130 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 FMNL3Q8IVF7 1028 aa16.67■□□□□ 0.26
LRRK1-201ENST00000388948 HSF2BPO75031 334 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 PSMC4P43686 418 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 AK2P54819 239 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 MXRA7P84157 204 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 GCKRQ14397 625 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 EDC4Q6P2E9 1401 aaKnown RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 PRPF6O94906 941 aaKnown RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 ATP2A2P16615 1042 aaKnown RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 PCDHB15Q9Y5E8 787 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 CTSWP56202 376 aa16.66■□□□□ 0.26
LRRK1-201ENST00000388948 LEO1Q8WVC0 666 aaPredicted RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
LRRK1-201ENST00000388948 NSMCE1Q8WV22 266 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.65■□□□□ 0.26
LRRK1-201ENST00000388948 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 TFAP4Q01664 338 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 KRT83P78385 493 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 PDE4DQ08499 809 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 PPP1R7Q15435 360 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-201ENST00000388948 RAD50Q92878 1312 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 COL17A1Q9UMD9 1497 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-201ENST00000388948 GEN1Q17RS7 908 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 FAM107BQ9H098 131 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
LRRK1-201ENST00000388948 F13A1P00488 732 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 ANGEL1Q9UNK9 670 aaKnown RBP16.64■□□□□ 0.25
LRRK1-201ENST00000388948 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 SMC1BQ8NDV3 1235 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 GSDMBQ8TAX9 411 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
LRRK1-201ENST00000388948 INF2Q27J81 1249 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 LOC102724428A0A0B4J2F2 783 aa16.64■□□□□ 0.25
LRRK1-201ENST00000388948 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms