RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CAPZA3Q96KX2 299 aa17.03■□□□□ 0.32
VLDLR-202ENST00000382099 ESF1Q9H501 851 aaKnown RBP17.03■□□□□ 0.32
VLDLR-202ENST00000382099 PFKFB2O60825 505 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 SHOX2O60902 331 aaPredicted RBP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 TRAF1Q13077 416 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 FMR1NBQ8N0W7 255 aaPredicted RBP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 GOLGA6L7A0A1B0GV03 622 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 AARSP49588 968 aaKnown RBP eCLIP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 WLSQ5T9L3 541 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.32
VLDLR-202ENST00000382099 NAPGQ99747 312 aaPredicted RBP17.02■□□□□ 0.32
VLDLR-202ENST00000382099 TUBBP07437 444 aa17.02■□□□□ 0.31
VLDLR-202ENST00000382099 KCTD16Q68DU8 428 aa17.02■□□□□ 0.31
VLDLR-202ENST00000382099 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.31
VLDLR-202ENST00000382099 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.31
VLDLR-202ENST00000382099 SMTNP53814 917 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 VIPAS39Q9H9C1 493 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 SLC27A2O14975 620 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 CLSTN1O94985 981 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
VLDLR-202ENST00000382099 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
VLDLR-202ENST00000382099 RIMS2Q9UQ26 1411 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 POLR3DP05423 398 aaPredicted RBP17■□□□□ 0.31
VLDLR-202ENST00000382099 TUBB4BP68371 445 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 TOB2Q14106 344 aaPredicted RBP17■□□□□ 0.31
VLDLR-202ENST00000382099 HSP90AB2PQ58FF8 381 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 CCDC121Q6ZUS5 278 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 TC2NQ8N9U0 490 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 CAGE1Q8TC20 777 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 ATP7BP35670 1465 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 FOXO3O43524 673 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 RPS6KB1P23443 525 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 RPS6KA3P51812 740 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 CCT2P78371 535 aaKnown RBP17■□□□□ 0.31
VLDLR-202ENST00000382099 NECTIN1Q15223 517 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
VLDLR-202ENST00000382099 FAM227BQ96M60 508 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 BAIAP2L1Q9UHR4 511 aa17■□□□□ 0.31
VLDLR-202ENST00000382099 BUB1BO60566 1050 aaPredicted RBP16.99■□□□□ 0.31
VLDLR-202ENST00000382099 BPIFA3Q9BQP9 254 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 VCPKMTQ9H867 229 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 HAUS2Q9NVX0 235 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 ANKRD33BA6NCL7 494 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
VLDLR-202ENST00000382099 WHAMMP3Q1A5X7 153 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 CYB5D1Q6P9G0 228 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 FAM210AQ96ND0 272 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 GRIN2DO15399 1336 aa16.99■□□□□ 0.31
VLDLR-202ENST00000382099 EIF4E1BA6NMX2 242 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 CAPRIN2Q6IMN6 1127 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 TPX2Q9ULW0 747 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 ENC1O14682 589 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 MYO1BO43795 1136 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 ADD1P35611 737 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 MYSM1Q5VVJ2 828 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 HOOK1Q9UJC3 728 aaKnown RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
VLDLR-202ENST00000382099 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 PPFIBP1Q86W92 1011 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 SH2D3CQ8N5H7 860 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 C3orf20Q8ND61 904 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 RPS6KL1Q9Y6S9 549 aa16.98■□□□□ 0.31
VLDLR-202ENST00000382099 IKBKBO14920 756 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 MYBL1P10243 752 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 MCM3P25205 808 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 ACCSLQ4AC99 568 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 ADGRG1Q9Y653 693 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
VLDLR-202ENST00000382099 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
VLDLR-202ENST00000382099 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 ACRBPQ8NEB7 543 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
VLDLR-202ENST00000382099 NEO1Q92859 1461 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 AOX1Q06278 1338 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 CPS1P31327 1500 aa16.97■□□□□ 0.31
VLDLR-202ENST00000382099 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 AGPSO00116 658 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 PYGLP06737 847 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 RAD9BQ6WBX8 426 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 Q6ZUG5 572 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 RASSF9O75901 435 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms