RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CPLX1O14810 134 aa21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 FGRP09769 529 aa21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 IL1R1P14778 569 aa21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SART3Q15020 963 aaKnown RBP21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ATP8A2Q9NTI2 1148 aa21.07■□□□□ 0.96
HLA-DQB1-201ENST00000374943 IFIT3O14879 490 aaKnown RBP21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ZBTB43O43298 467 aa21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CDKL5O76039 1030 aa21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 RCAN1P53805 252 aa21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 LRSAM1Q6UWE0 723 aa21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 DZIP1Q86YF9 867 aaKnown RBP21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 FOCADQ5VW36 1801 aa21.06■□□□□ 0.96
HLA-DQB1-201ENST00000374943 LDHBP07195 334 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ATL3Q6DD88 541 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 FAM173BQ6P4H8 233 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SP8Q8IXZ3 490 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 DDX60LQ5H9U9 1706 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 GSTO1P78417 241 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CCDC183Q5T5S1 534 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 TMTC2Q8N394 836 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 TBC1D16Q8TBP0 767 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ESR2Q92731 530 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CD209Q9NNX6 404 aa21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 AATFQ9NY61 560 aaKnown RBP eCLIP21.05■□□□□ 0.96
HLA-DQB1-201ENST00000374943 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 BAG6P46379 1132 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SBK1Q52WX2 424 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CTR9Q6PD62 1173 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 NFXL1Q6ZNB6 911 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 DCP1AQ9NPI6 582 aaPredicted RBP21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CFAP45Q9UL16 551 aa21.04■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SYCE3A1L190 88 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 CCDC69A6NI79 296 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SRGNP10124 158 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 NPR1P16066 1061 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 WTAPQ15007 396 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 RRP12Q5JTH9 1297 aaKnown RBP21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 LEO1Q8WVC0 666 aaPredicted RBP21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SPATA32Q96LK8 384 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ARPP21Q9UBL0 812 aaPredicted RBP21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ATP6V0A2Q9Y487 856 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 SLC12A7Q9Y666 1083 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 STK36Q9NRP7 1315 aa21.03■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ERICH2A1L162 156 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 RAB11FIP4Q86YS3 637 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 C8orf76Q96K31 380 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 GPR101Q96P66 508 aaPredicted RBP21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 TOMM22Q9NS69 142 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 POLLQ9UGP5 575 aa21.02■□□□□ 0.96
HLA-DQB1-201ENST00000374943 PSDA5PKW4 1024 aaPredicted RBP21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ORC4O43929 436 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 LETM1O95202 739 aaPredicted RBP21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 CDC27P30260 824 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PDE6BP35913 854 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 NT5C2P49902 561 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PPP4CP60510 307 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 NTRK3Q16288 839 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MICU3Q86XE3 530 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 CERS3Q8IU89 383 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FBXO18Q8NFZ0 1043 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 JAG2Q9Y219 1238 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.95
HLA-DQB1-201ENST00000374943 LDHCP07864 332 aa21.01■□□□□ 0.95
HLA-DQB1-201ENST00000374943 SEC23AQ15436 765 aa21.01■□□□□ 0.95
HLA-DQB1-201ENST00000374943 UBAC1Q9BSL1 405 aa21.01■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PANK2Q9BZ23 570 aa21.01■□□□□ 0.95
HLA-DQB1-201ENST00000374943 USP17L12C9JPN9 530 aa21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 USP17L21D6R901 530 aa21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MMP10P09238 476 aa21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 TFIP11Q9UBB9 837 aaKnown RBP21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MROH7-TTC4A0A0A0MT08 1334 aa21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FAM205AQ6ZU69 1335 aa21■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ALDH1B1P30837 517 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 FOSBP53539 338 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 TBC1D22AQ8WUA7 517 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ZNF396Q96N95 335 aaPredicted RBP20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MKRN1Q9UHC7 482 aaKnown RBP20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 MYH1P12882 1939 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 CYP2D7A0A087X1C5 515 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 BAG3O95817 575 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 SLC3A2P08195 630 aaKnown RBP20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 TNKSO95271 1327 aa20.99■□□□□ 0.95
HLA-DQB1-201ENST00000374943 ROBO3Q96MS0 1386 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PPFIA3O75145 1194 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 IFNAR1P17181 557 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 RXRAP19793 462 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 GUCY1B3Q02153 619 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 PPP2R5BQ15173 497 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 GRIK5Q16478 980 aa20.98■□□□□ 0.95
HLA-DQB1-201ENST00000374943 BRAPQ7Z569 592 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms